RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 FAM204AQ9H8W3 233 aa13.44□□□□□ -0.26
RBM39-206ENST00000403542 DDAH1O94760 285 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 MYBL2P10244 700 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 MTIF2P46199 727 aaKnown RBP13.43□□□□□ -0.26
RBM39-206ENST00000403542 PIP4K2BP78356 416 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 C2orf54Q08AI8 447 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 STK4Q13043 487 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 DZIP1Q86YF9 867 aaKnown RBP13.43□□□□□ -0.26
RBM39-206ENST00000403542 ADSSL1Q8N142 457 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 MSANTD4Q8NCY6 345 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 CCDC148Q8NFR7 591 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 TUBGCP2Q9BSJ2 902 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 BRIP1Q9BX63 1249 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 IL17RBQ9NRM6 502 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 EHD2Q9NZN4 543 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 LRRC10BA6NIK2 292 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 ZPR1O75312 459 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 ASIC1P78348 528 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 AMPD2Q01433 879 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 SPAG1Q07617 926 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 SLC35G1Q2M3R5 365 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 LEKR1Q6ZMV7 388 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 CCDC51Q96ER9 411 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 POLD4Q9HCU8 107 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 FAM207AQ9NSI2 230 aaPredicted RBP13.43□□□□□ -0.26
RBM39-206ENST00000403542 RSPH14Q9UHP6 348 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 RAB21Q9UL25 225 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 SAR1BQ9Y6B6 198 aa13.43□□□□□ -0.26
RBM39-206ENST00000403542 SEMA3EO15041 775 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 CCNT1O60563 726 aaKnown RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 EIF3JO75822 258 aaKnown RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 PLCG1P19174 1290 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 TECP42680 631 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 RCAN1P53805 252 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 PDE4DQ08499 809 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 PPP2R5BQ15173 497 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 DDB1Q16531 1140 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 WHAMMP3Q1A5X7 153 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 PARP10Q53GL7 1025 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 C4orf32Q8N8J7 132 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 JAKMIP2Q96AA8 810 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 SLC39A2Q9NP94 309 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 ZNF804BA4D1E1 1349 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 ITIH6Q6UXX5 1313 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 MYH13Q9UKX3 1938 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 FAM170AA1A519 330 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 PDE2AO00408 941 aaPredicted RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 PSMA7O14818 248 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 CYTH3O43739 400 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 IDEP14735 1019 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 GRIK5Q16478 980 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 TXNRD1Q16881 649 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 ANKRD40Q6AI12 368 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 DYMQ7RTS9 669 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 EXOC4Q96A65 974 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 RMND1Q9NWS8 449 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 SRP68Q9UHB9 627 aaKnown RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 FEZ2Q9UHY8 353 aaPredicted RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
RBM39-206ENST00000403542 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 EP400Q96L91 3159 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 LGALS16A8MUM7 142 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 H7C1D1 291 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 HIBADHP31937 336 aaKnown RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 ENOX2Q16206 610 aaKnown RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 CCDC96Q2M329 555 aa13.42□□□□□ -0.26
RBM39-206ENST00000403542 DNAJC21Q5F1R6 531 aaKnown RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 TTC19Q6DKK2 380 aaPredicted RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 NHEJ1Q9H9Q4 299 aaPredicted RBP13.42□□□□□ -0.26
RBM39-206ENST00000403542 NUTM2BA6NNL0 878 aaPredicted RBP13.41□□□□□ -0.26
RBM39-206ENST00000403542 NUTM2EB1AL46 878 aaPredicted RBP13.41□□□□□ -0.26
RBM39-206ENST00000403542 TSPY3P0CV98 308 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 TSPY8P0CW00 308 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 ACTN2P35609 894 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 SLC7A5Q01650 507 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 MAPKAPK5Q8IW41 473 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 TGFBRAP1Q8WUH2 860 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 GJA10Q969M2 543 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 LRWD1Q9UFC0 647 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 PCDHA6Q9UN73 950 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 PCDHA4Q9UN74 947 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 PCDHA8Q9Y5H6 950 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 MYO1CO00159 1063 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 RNF40O75150 1001 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 IPO7O95373 1038 aaKnown RBP13.41□□□□□ -0.26
RBM39-206ENST00000403542 KIF5BP33176 963 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 LONP1P36776 959 aaKnown RBP13.41□□□□□ -0.26
RBM39-206ENST00000403542 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 PTF1AQ7RTS3 328 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 CCDC155Q8N6L0 562 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 SH3RF3Q8TEJ3 882 aaPredicted RBP13.41□□□□□ -0.26
RBM39-206ENST00000403542 HDAC7Q8WUI4 952 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 CNOT6LQ96LI5 555 aaKnown RBP13.41□□□□□ -0.26
RBM39-206ENST00000403542 MTA3Q9BTC8 594 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 NOC4LQ9BVI4 516 aaKnown RBP13.41□□□□□ -0.26
RBM39-206ENST00000403542 KANSL2Q9H9L4 492 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 MLXIPQ9HAP2 919 aa13.41□□□□□ -0.26
RBM39-206ENST00000403542 EPHB6O15197 1021 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms