RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 PHKBQ93100 1093 aa10.16□□□□□ -0.78
CCR9-203ENST00000395963 OTUD5Q96G74 571 aa10.16□□□□□ -0.78
CCR9-203ENST00000395963 RPAP3Q9H6T3 665 aaPredicted RBP10.16□□□□□ -0.78
CCR9-203ENST00000395963 GPCPD1Q9NPB8 672 aa10.16□□□□□ -0.78
CCR9-203ENST00000395963 PRDM4Q9UKN5 801 aa10.16□□□□□ -0.78
CCR9-203ENST00000395963 MTMR6Q9Y217 621 aa10.16□□□□□ -0.78
CCR9-203ENST00000395963 RBBP6Q7Z6E9 1792 aaKnown RBP10.16□□□□□ -0.78
CCR9-203ENST00000395963 FRMPD2Q68DX3 1309 aaPredicted RBP10.16□□□□□ -0.78
CCR9-203ENST00000395963 TRIM75PA6NK02 468 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 UBE2Q2LH0YL09 131 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 ICAM1P05362 532 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 SLC10A3P09131 477 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 U2AF2P26368 475 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCR9-203ENST00000395963 TRAPPC10P48553 1259 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 CSPP1Q1MSJ5 1256 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 SAPCD2Q86UD0 394 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 FBXO11Q86XK2 927 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 NAP1L4Q99733 375 aaKnown RBP10.15□□□□□ -0.78
CCR9-203ENST00000395963 SLC38A10Q9HBR0 1119 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 MRPL11Q9Y3B7 192 aaKnown RBP10.15□□□□□ -0.78
CCR9-203ENST00000395963 RABGAP1Q9Y3P9 1069 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 STXBP3O00186 592 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 F13A1P00488 732 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 MRPL12P52815 198 aaKnown RBP10.15□□□□□ -0.78
CCR9-203ENST00000395963 HMGCS2P54868 508 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 HUNKP57058 714 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 SREBF2Q12772 1141 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 IKQ13123 557 aaPredicted RBP10.15□□□□□ -0.78
CCR9-203ENST00000395963 AP3B2Q13367 1082 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 KRT40Q6A162 431 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 DDX11Q96FC9 970 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 ZNF408Q9H9D4 720 aa10.15□□□□□ -0.78
CCR9-203ENST00000395963 RLFQ13129 1914 aa10.15□□□□□ -0.79
CCR9-203ENST00000395963 PIK3CDO00329 1044 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 FOSP01100 380 aaPredicted RBP10.14□□□□□ -0.79
CCR9-203ENST00000395963 GOLGA8HP0CJ92 632 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 KRT2P35908 639 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 GCLCP48506 637 aaPredicted RBP10.14□□□□□ -0.79
CCR9-203ENST00000395963 PRKG1Q13976 671 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 QRICH1Q2TAL8 776 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 MCF2L2Q86YR7 1114 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 RAB11FIP4Q86YS3 637 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 RASAL3Q86YV0 1011 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 ZNF784Q8NCA9 323 aaPredicted RBP10.14□□□□□ -0.79
CCR9-203ENST00000395963 CLMNQ96JQ2 1002 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 GBP4Q96PP9 640 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 PIGSQ96S52 555 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 TANGO6Q9C0B7 1094 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 CREBZFQ9NS37 354 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 PCDHA4Q9UN74 947 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 CTDP1Q9Y5B0 961 aaPredicted RBP10.14□□□□□ -0.79
CCR9-203ENST00000395963 THSD7BQ9C0I4 1608 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 FLOT1O75955 427 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 BMP15O95972 392 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 SLC35G1Q2M3R5 365 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 KIAA1755Q5JYT7 1200 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 WWC2Q6AWC2 1192 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 OTUD7BQ6GQQ9 843 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 MTERF4Q7Z6M4 381 aaKnown RBP10.14□□□□□ -0.79
CCR9-203ENST00000395963 EHMT1Q9H9B1 1298 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 RIC8AQ9NPQ8 531 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 FBXO40Q9UH90 709 aa10.14□□□□□ -0.79
CCR9-203ENST00000395963 LOC102724159A0A0B4J2E5 919 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 NAPAP54920 295 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 IRX3P78415 501 aaPredicted RBP10.13□□□□□ -0.79
CCR9-203ENST00000395963 KIF23Q02241 960 aaPredicted RBP10.13□□□□□ -0.79
CCR9-203ENST00000395963 MOGSQ13724 837 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 PWP2Q15269 919 aaKnown RBP10.13□□□□□ -0.79
CCR9-203ENST00000395963 TTBK2Q6IQ55 1244 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 KRT25Q7Z3Z0 450 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 SHCBP1Q8NEM2 672 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 CUL5Q93034 780 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 MS4A4AQ96JQ5 239 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 UBA5Q9GZZ9 404 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 MYH15Q9Y2K3 1946 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 FSD2A1L4K1 749 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 VPS37CA5D8V6 355 aaPredicted RBP10.13□□□□□ -0.79
CCR9-203ENST00000395963 RASSF10A6NK89 507 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 VWA5AO00534 786 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 RAD21O60216 631 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 SLC25A27O95847 323 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 ALDH1A1P00352 501 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 XRCC6P12956 609 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCR9-203ENST00000395963 ADCY7P51828 1080 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 NLRP5P59047 1200 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 RESTQ13127 1097 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 RILPL1Q5EBL4 403 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 BLIDQ8IZY5 108 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 SPICE1Q8N0Z3 855 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 CHST13Q8NET6 341 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 ZNF396Q96N95 335 aaPredicted RBP10.13□□□□□ -0.79
CCR9-203ENST00000395963 PARK7Q99497 189 aaKnown RBP10.13□□□□□ -0.79
CCR9-203ENST00000395963 PANK2Q9BZ23 570 aa10.13□□□□□ -0.79
CCR9-203ENST00000395963 NOL7Q9UMY1 257 aaKnown RBP10.13□□□□□ -0.79
CCR9-203ENST00000395963 NCLP19338 710 aaKnown RBP10.12□□□□□ -0.79
CCR9-203ENST00000395963 APLP1P51693 650 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 ZYXQ15942 572 aaKnown RBP10.12□□□□□ -0.79
CCR9-203ENST00000395963 HEATR3Q7Z4Q2 680 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 REPS2Q8NFH8 660 aa10.12□□□□□ -0.79
CCR9-203ENST00000395963 TEX13BQ9BXU2 312 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms