RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	SERTAD1	Q9UHV2	236 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	MAN1B1	Q9UKM7	699 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	PCDHA6	Q9UN73	950 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	PCDHA8	Q9Y5H6	950 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	PCDHA5	Q9Y5H7	936 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348		F8W031	263 aa	Predicted RBP	10.48	□□□□□ -0.73
MITF-205	ENST00000394348	ATP2B1	P20020	1258 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	MMP14	P50281	582 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	SCNN1D	P51172	638 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	NAPA	P54920	295 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	ZNF543	Q08ER8	600 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	NONO	Q15233	471 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
MITF-205	ENST00000394348	TYW1B	Q6NUM6	668 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	TATDN1	Q6P1N9	297 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	POTEA	Q6S8J7	498 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	DRC7	Q8IY82	874 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	ENOX1	Q8TC92	643 aa	Known RBP	10.48	□□□□□ -0.73
MITF-205	ENST00000394348	KIAA1524	Q8TCG1	905 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	DCAF4	Q8WV16	495 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	MTMR8	Q96EF0	704 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	GTPBP4	Q9BZE4	634 aa	Known RBP	10.48	□□□□□ -0.73
MITF-205	ENST00000394348	NYAP2	Q9P242	653 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	MYH4	Q9Y623	1939 aa		10.48	□□□□□ -0.73
MITF-205	ENST00000394348	ARFGEF1	Q9Y6D6	1849 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	USP17L5	A8MUK1	530 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	BIN1	O00499	593 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	WNT7A	O00755	349 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	VEGFA	P15692	232 aa	Predicted RBP	10.47	□□□□□ -0.73
MITF-205	ENST00000394348	CHRNA5	P30532	468 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	EN1	Q05925	392 aa	Predicted RBP	10.47	□□□□□ -0.73
MITF-205	ENST00000394348	SF3B2	Q13435	895 aa	Known RBP	10.47	□□□□□ -0.73
MITF-205	ENST00000394348	E2F4	Q16254	413 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	USP17L2	Q6R6M4	530 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	CCDC186	Q7Z3E2	898 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	TTLL6	Q8N841	843 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	SPC24	Q8NBT2	197 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	CCDC150	Q8NCX0	1101 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	ERCC4	Q92889	916 aa	Predicted RBP	10.47	□□□□□ -0.73
MITF-205	ENST00000394348	PAGE5	Q96GU1	130 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	MXD3	Q9BW11	206 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	CCSER1	Q9C0I3	900 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	KCNF1	Q9H3M0	494 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	CUEDC2	Q9H467	287 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	TTC12	Q9H892	705 aa	Predicted RBP	10.47	□□□□□ -0.73
MITF-205	ENST00000394348	KANSL2	Q9H9L4	492 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	FAM198A	Q9UFP1	575 aa		10.47	□□□□□ -0.73
MITF-205	ENST00000394348	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.47	□□□□□ -0.73
MITF-205	ENST00000394348	PNMA6F	A0A0J9YX94	578 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	VWA3A	A6NCI4	1184 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	SMCO2	A6NFE2	343 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	PPIP5K2	O43314	1243 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	GTPBP6	O43824	516 aa	Predicted RBP	10.46	□□□□□ -0.73
MITF-205	ENST00000394348	PTGS1	P23219	599 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	HOXA7	P31268	230 aa	Predicted RBP	10.46	□□□□□ -0.73
MITF-205	ENST00000394348	MCM7	P33993	719 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	KCNJ6	P48051	423 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	NFIA	Q12857	509 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	DPYD	Q12882	1025 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.46	□□□□□ -0.73
MITF-205	ENST00000394348	NOM1	Q5C9Z4	860 aa	Known RBP	10.46	□□□□□ -0.73
MITF-205	ENST00000394348	SPECC1	Q5M775	1068 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	FKBP1C	Q5VVH2	108 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	MCTP2	Q6DN12	878 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	PDXDC2P	Q6P474	469 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	DTHD1	Q6ZMT9	781 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	TMEM179	Q6ZVK1	233 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	USP49	Q70CQ1	688 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	NEK8	Q86SG6	692 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	KIAA0825	Q8IV33	1275 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	REXO1	Q8N1G1	1221 aa	Known RBP	10.46	□□□□□ -0.73
MITF-205	ENST00000394348	SLAIN1	Q8ND83	568 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	DHX58	Q96C10	678 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	EPSTI1	Q96J88	318 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	NAP1L4	Q99733	375 aa	Known RBP	10.46	□□□□□ -0.73
MITF-205	ENST00000394348	KCND1	Q9NSA2	647 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348	RMND1	Q9NWS8	449 aa		10.46	□□□□□ -0.73
MITF-205	ENST00000394348		A0A087X0B3	334 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	SLC26A4	O43511	780 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	OR52Z1	P0C646	297 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	GOLGA8H	P0CJ92	632 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	BMP6	P22004	513 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	ADCY7	P51828	1080 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	FANCC	Q00597	558 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	AOC3	Q16853	763 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	CERKL	Q49MI3	558 aa	Predicted RBP	10.45	□□□□□ -0.74
MITF-205	ENST00000394348	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.45	□□□□□ -0.74
MITF-205	ENST00000394348	MICALL2	Q8IY33	904 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	LRRC47	Q8N1G4	583 aa	Known RBP	10.45	□□□□□ -0.74
MITF-205	ENST00000394348	MTMR14	Q8NCE2	650 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	GMCL1P1	Q8NEA9	526 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	PIGS	Q96S52	555 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	TRIM34	Q9BYJ4	488 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	HSD3B7	Q9H2F3	369 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	DNAJC18	Q9H819	358 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	RIC8A	Q9NPQ8	531 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	TMOD2	Q9NZR1	351 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348	HERC5	Q9UII4	1024 aa	Known RBP	10.45	□□□□□ -0.74
MITF-205	ENST00000394348	HDAC9	Q9UKV0	1011 aa		10.45	□□□□□ -0.74
MITF-205	ENST00000394348		A0A087WWV3	80 aa		10.44	□□□□□ -0.74
MITF-205	ENST00000394348	YDJC	A8MPS7	323 aa		10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms