RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 MCMDC2Q4G0Z9 681 aa7.49□□□□□ -1.21
NUP58-204ENST00000394327 C1orf53Q5VUE5 145 aa7.49□□□□□ -1.21
NUP58-204ENST00000394327 CWC27Q6UX04 472 aaKnown RBP7.49□□□□□ -1.21
NUP58-204ENST00000394327 COL26A1Q96A83 441 aa7.49□□□□□ -1.21
NUP58-204ENST00000394327 MXD3Q9BW11 206 aa7.49□□□□□ -1.21
NUP58-204ENST00000394327 GPRC5DQ9NZD1 345 aa7.49□□□□□ -1.21
NUP58-204ENST00000394327 DAGLAQ9Y4D2 1042 aa7.49□□□□□ -1.21
NUP58-204ENST00000394327 DNMT3AQ9Y6K1 912 aaPredicted RBP7.49□□□□□ -1.21
NUP58-204ENST00000394327 TRPM7Q96QT4 1865 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 CCDC171Q6TFL3 1326 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 A0A0D9SFI3 127 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 MYO1BO43795 1136 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 REC8O95072 547 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 SERPINB4P48594 390 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 RBM5P52756 815 aaKnown RBP eCLIP7.48□□□□□ -1.21
NUP58-204ENST00000394327 MTMR3Q13615 1198 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 DLGAP5Q15398 846 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 ECM1Q16610 540 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 CFAP100Q494V2 611 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 RIPOR1Q6ZS17 1223 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 TRIM22Q8IYM9 498 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 VWA5B2Q8N398 1253 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 ZNF384Q8TF68 577 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 MYO19Q96H55 970 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 FAM227BQ96M60 508 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 MYOZ2Q9NPC6 264 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 TMOD2Q9NZR1 351 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 DMGDHQ9UI17 866 aaKnown RBP7.48□□□□□ -1.21
NUP58-204ENST00000394327 CNOT7Q9UIV1 285 aaKnown RBP7.48□□□□□ -1.21
NUP58-204ENST00000394327 ATAD5Q96QE3 1844 aa7.48□□□□□ -1.21
NUP58-204ENST00000394327 SGSM2O43147 1006 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 GPAA1O43292 621 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 EPB41L2O43491 1005 aaKnown RBP7.47□□□□□ -1.21
NUP58-204ENST00000394327 DDNO94850 711 aaPredicted RBP7.47□□□□□ -1.21
NUP58-204ENST00000394327 MBD4O95243 580 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 GRNP28799 593 aaKnown RBP7.47□□□□□ -1.21
NUP58-204ENST00000394327 BTDP43251 543 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 KIAA1211Q6ZU35 1233 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 ADGRA1Q86SQ6 560 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 MIGA1Q8NAN2 632 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 NANOS1Q8WY41 292 aaKnown RBP7.47□□□□□ -1.21
NUP58-204ENST00000394327 OSBP2Q969R2 916 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 SUSD3Q96L08 255 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 CRNKL1Q9BZJ0 848 aaKnown RBP7.47□□□□□ -1.21
NUP58-204ENST00000394327 PUS7LQ9H0K6 701 aaKnown RBP7.47□□□□□ -1.21
NUP58-204ENST00000394327 ADARB2Q9NS39 739 aaKnown RBP7.47□□□□□ -1.21
NUP58-204ENST00000394327 NDFIP2Q9NV92 336 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 AATFQ9NY61 560 aaKnown RBP eCLIP7.47□□□□□ -1.21
NUP58-204ENST00000394327 HACL1Q9UJ83 578 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 SIPA1L1O43166 1804 aa7.47□□□□□ -1.21
NUP58-204ENST00000394327 ZMYM6O95789 1325 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 COL2A1P02458 1487 aaPredicted RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 M0R2C6 588 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 GPR25O00155 361 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 ZBTB39O15060 712 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 BRD1O95696 1058 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 DGKZQ13574 1117 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 TNFAIP1Q13829 316 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 GRIN2CQ14957 1233 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 RTN1Q16799 776 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 KIF4BQ2VIQ3 1234 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 C8orf34Q49A92 452 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 FKBP1CQ5VVH2 108 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 APOBEC3HQ6NTF7 200 aaKnown RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 GIMAP6Q6P9H5 292 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 LRRC69Q6ZNQ3 347 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 USP50Q70EL3 339 aaPredicted RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 PNMA8AQ86V59 439 aaPredicted RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 HOMEZQ8IX15 550 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 GTF3C2Q8WUA4 911 aaPredicted RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 GTPBP3Q969Y2 492 aaKnown RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 ZBED3Q96IU2 234 aaPredicted RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 STRBPQ96SI9 672 aaKnown RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 RIOK1Q9BRS2 568 aaKnown RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 NACAP1Q9BZK3 213 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 ZCCHC2Q9C0B9 1178 aaKnown RBP7.46□□□□□ -1.21
NUP58-204ENST00000394327 ANO2Q9NQ90 1003 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 ATP8A2Q9NTI2 1148 aa7.46□□□□□ -1.21
NUP58-204ENST00000394327 PITPNM2Q9BZ72 1349 aa7.46□□□□□ -1.22
NUP58-204ENST00000394327 WNT10BO00744 389 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 CHGBP05060 677 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 EPHX2P34913 555 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 TNNI2P48788 182 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 C16orf46Q6P387 395 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 APOBEC3FQ8IUX4 373 aaKnown RBP7.45□□□□□ -1.22
NUP58-204ENST00000394327 ETFBKMTQ8IXQ9 262 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 AMOTL1Q8IY63 956 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 TEX11Q8IYF3 940 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 LCORLQ8N3X6 602 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 PRMT6Q96LA8 375 aaPredicted RBP7.45□□□□□ -1.22
NUP58-204ENST00000394327 SEC62Q99442 399 aaKnown RBP7.45□□□□□ -1.22
NUP58-204ENST00000394327 DSCC1Q9BVC3 393 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 NUCKS1Q9H1E3 243 aaKnown RBP7.45□□□□□ -1.22
NUP58-204ENST00000394327 ARMT1Q9H993 441 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 UPF2Q9HAU5 1272 aaKnown RBP7.45□□□□□ -1.22
NUP58-204ENST00000394327 USP40Q9NVE5 1235 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 SLC4A4Q9Y6R1 1079 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 MYH4Q9Y623 1939 aa7.45□□□□□ -1.22
NUP58-204ENST00000394327 PATL2C9JE40 543 aaKnown RBP7.44□□□□□ -1.22
NUP58-204ENST00000394327 BNIP3LO60238 219 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms