RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 UBXN2AP68543 259 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 TROAPQ12815 778 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 KCTD2Q14681 263 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 TKFCQ3LXA3 575 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 CHST13Q8NET6 341 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 ZNF333Q96JL9 665 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 FBXO40Q9UH90 709 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 MAD2L2Q9UI95 211 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 PNMA2Q9UL42 364 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
PDLIM7-204ENST00000393546 PALM3A6NDB9 673 aaPredicted RBP22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 KLRF2D3W0D1 207 aa22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 ICAM1P05362 532 aa22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 GRM4Q14833 912 aa22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 BLOC1S2Q6QNY1 142 aa22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 ZNF654Q8IZM8 581 aa22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 STAG2Q8N3U4 1231 aa22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 NUP133Q8WUM0 1156 aa22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 MAP3K14Q99558 947 aa22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 APBA2Q99767 749 aa22.15■■□□□ 1.14
PDLIM7-204ENST00000393546 DHX16O60231 1041 aaKnown RBP22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 DDAH1O94760 285 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 HOXC6P09630 235 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 ALAS1P13196 640 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 FGD1P98174 961 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 SYNE3Q6ZMZ3 975 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 ADGRF4Q8IZF3 695 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 TRERF1Q96PN7 1200 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 CPVLQ9H3G5 476 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 VAT1LQ9HCJ6 419 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 CCPG1Q9ULG6 757 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 SLC12A7Q9Y666 1083 aa22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 ZNFX1Q9P2E3 1918 aaKnown RBP22.14■■□□□ 1.13
PDLIM7-204ENST00000393546 HMGCRP04035 888 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 CALM1P0DP23 149 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 CALM2P0DP24 149 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 CALM3P0DP25 149 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 KIF5BP33176 963 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 SGMS1Q86VZ5 419 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 CTCFLQ8NI51 663 aaPredicted RBP22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 DDX11Q96FC9 970 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 TCEANC2Q96MN5 208 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 ACAD9Q9H845 621 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 HOMER2Q9NSB8 354 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 RNF146Q9NTX7 359 aa22.13■■□□□ 1.13
PDLIM7-204ENST00000393546 COBLO75128 1261 aa22.12■■□□□ 1.13
PDLIM7-204ENST00000393546 INHAP05111 366 aa22.12■■□□□ 1.13
PDLIM7-204ENST00000393546 ANKRD35Q8N283 1001 aa22.12■■□□□ 1.13
PDLIM7-204ENST00000393546 NPLOC4Q8TAT6 608 aa22.12■■□□□ 1.13
PDLIM7-204ENST00000393546 TMEM106CQ9BVX2 250 aa22.12■■□□□ 1.13
PDLIM7-204ENST00000393546 MYCP01106 439 aaPredicted RBP22.11■■□□□ 1.13
PDLIM7-204ENST00000393546 CPA1P15085 419 aa22.11■■□□□ 1.13
PDLIM7-204ENST00000393546 CASTP20810 708 aaKnown RBP22.11■■□□□ 1.13
PDLIM7-204ENST00000393546 RPS6KB1P23443 525 aa22.11■■□□□ 1.13
PDLIM7-204ENST00000393546 CCL14Q16627 93 aa22.11■■□□□ 1.13
PDLIM7-204ENST00000393546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.11■■□□□ 1.13
PDLIM7-204ENST00000393546 TRIB2Q92519 343 aa22.11■■□□□ 1.13
PDLIM7-204ENST00000393546 MYL10Q9BUA6 226 aa22.11■■□□□ 1.13
PDLIM7-204ENST00000393546 JMJD4Q9H9V9 463 aa22.11■■□□□ 1.13
PDLIM7-204ENST00000393546 PGK2P07205 417 aa22.1■■□□□ 1.13
PDLIM7-204ENST00000393546 GNAQP50148 359 aa22.1■■□□□ 1.13
PDLIM7-204ENST00000393546 CDC37Q16543 378 aaPredicted RBP22.1■■□□□ 1.13
PDLIM7-204ENST00000393546 MFSD14CQ5VZR4 134 aa22.1■■□□□ 1.13
PDLIM7-204ENST00000393546 TM6SF1Q9BZW5 370 aa22.1■■□□□ 1.13
PDLIM7-204ENST00000393546 ZNF236Q9UL36 1845 aa22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 SEC24BO95487 1268 aa22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 MTFR1Q15390 333 aa22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 Q6ZUG5 572 aa22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 RUFY3Q7L099 469 aa22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 LZTS2Q9BRK4 669 aa22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 ZSWIM6Q9HCJ5 1215 aa22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 DIS3Q9Y2L1 958 aaKnown RBP22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 CYP46A1Q9Y6A2 500 aa22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 HTTP42858 3142 aa22.09■■□□□ 1.13
PDLIM7-204ENST00000393546 CCL5P13501 91 aa22.08■■□□□ 1.13
PDLIM7-204ENST00000393546 QRICH1Q2TAL8 776 aa22.08■■□□□ 1.13
PDLIM7-204ENST00000393546 ZNF792Q3KQV3 632 aa22.08■■□□□ 1.13
PDLIM7-204ENST00000393546 MUM1L1Q5H9M0 696 aa22.08■■□□□ 1.13
PDLIM7-204ENST00000393546 OLFML2BQ68BL8 750 aa22.08■■□□□ 1.13
PDLIM7-204ENST00000393546 FANCBQ8NB91 859 aa22.08■■□□□ 1.13
PDLIM7-204ENST00000393546 RNF208Q9H0X6 261 aa22.08■■□□□ 1.13
PDLIM7-204ENST00000393546 RIOX1Q9H6W3 641 aa22.08■■□□□ 1.13
PDLIM7-204ENST00000393546 FLRT1Q9NZU1 646 aa22.08■■□□□ 1.13
PDLIM7-204ENST00000393546 ZBTB43O43298 467 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 RXRAP19793 462 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 SMARCA1P28370 1054 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 SOX10P56693 466 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 ANAPC15P60006 121 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 TRIM32Q13049 653 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 USH1GQ495M9 461 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 C8orf34Q49A92 452 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 APOA5Q6Q788 366 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 MICU3Q86XE3 530 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 FBXO11Q86XK2 927 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 CCDC144CPQ8IYA2 1237 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 FBXL16Q8N461 479 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 MTMR8Q96EF0 704 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 MAML3Q96JK9 1138 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 UNC93B1Q9H1C4 597 aa22.07■■□□□ 1.12
PDLIM7-204ENST00000393546 HMX1Q9NP08 348 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms