RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 INO80B-WBP1J3KQ70 363 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 ZNF197O14709 1029 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 TTI1O43156 1089 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 KDM1AO60341 852 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 SDSP20132 328 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 ARL4DP49703 201 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 COG7P83436 770 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 MCM6Q14566 821 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 NOLC1Q14978 699 aaKnown RBP eCLIP4.36□□□□□ -1.71
UBR3-202ENST00000392632 SFMBT2Q5VUG0 894 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 PIK3AP1Q6ZUJ8 805 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 NBPF11Q86T75 865 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 FAM160B2Q86V87 743 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 SESTD1Q86VW0 696 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 PLA2G4DQ86XP0 818 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 MYLK4Q86YV6 388 aaPredicted RBP4.36□□□□□ -1.71
UBR3-202ENST00000392632 MAPKAPK5Q8IW41 473 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 KRT222Q8N1A0 295 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 FNBP4Q8N3X1 1017 aaPredicted RBP4.36□□□□□ -1.71
UBR3-202ENST00000392632 SEPT8Q92599 483 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 ARHGEF1Q92888 912 aaKnown RBP4.36□□□□□ -1.71
UBR3-202ENST00000392632 FAM89AQ96GI7 184 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 RPGRIP1Q96KN7 1286 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 GDAP1L1Q96MZ0 367 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 NUDCD1Q96RS6 583 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 DDX50Q9BQ39 737 aaKnown RBP4.36□□□□□ -1.71
UBR3-202ENST00000392632 EFHD1Q9BUP0 239 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 VPS37BQ9H9H4 285 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 HOMER3Q9NSC5 361 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 EHD2Q9NZN4 543 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 MOSPD1Q9UJG1 213 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 AMFRQ9UKV5 643 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 PPP1R9AQ9ULJ8 1098 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 HYOU1Q9Y4L1 999 aa4.36□□□□□ -1.71
UBR3-202ENST00000392632 RRP9O43818 475 aaKnown RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 MOCS3O95396 460 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 F13A1P00488 732 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 IFNB1P01574 187 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 PDE6CP51160 858 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 STX17P56962 302 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 NMIQ13287 307 aaPredicted RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 KLHL40Q2TBA0 621 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 SLFN13Q68D06 897 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 MAEAQ7L5Y9 396 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 CABP7Q86V35 215 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 SIX6OS1Q8N1H7 587 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TTC39CQ8N584 583 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 AOPEPQ8N6M6 819 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 RDH13Q8NBN7 331 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 CFAP36Q96G28 342 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TRAIPQ9BWF2 469 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 DRC3Q9H069 523 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 AATFQ9NY61 560 aaKnown RBP eCLIP4.35□□□□□ -1.71
UBR3-202ENST00000392632 DACT1Q9NYF0 836 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 STK17AQ9UEE5 414 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 ARMCX3Q9UH62 379 aaPredicted RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 STRIP2Q9ULQ0 834 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 PCDHA12Q9UN75 941 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 G3BP2Q9UN86 482 aaKnown RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 KDM2BQ8NHM5 1336 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 MYO3BQ8WXR4 1341 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 RIMS2Q9UQ26 1411 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 NVLO15381 856 aaKnown RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 ZNF18P17022 549 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 ECE1P42892 770 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 NSFP46459 744 aaKnown RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 IGBP1P78318 339 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TYRO3Q06418 890 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 DSTYKQ6XUX3 929 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TBC1D9Q6ZT07 1266 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TGFBRAP1Q8WUH2 860 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TMX3Q96JJ7 454 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 FGD4Q96M96 766 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 ACAP3Q96P50 834 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 NEUROG2Q9H2A3 272 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 SLC38A10Q9HBR0 1119 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 HPCAL4Q9UM19 191 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 RIPOR2Q9Y4F9 1068 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 FPGT-TNNI3KV9GXZ4 949 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 SMARCA4P51532 1647 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 NCKAP5LQ9HCH0 1330 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 hCG_1984214I3L0E3 225 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 CEP104O60308 925 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 EVI5O60447 810 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 GCFC2P16383 781 aaKnown RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 GAP43P17677 238 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 ZNF131P52739 623 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TSPY1Q01534 308 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TFCP2Q12800 502 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 HDAC1Q13547 482 aaPredicted RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 THOC5Q13769 683 aaKnown RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 CFAP221Q4G0U5 840 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TMED8Q6PL24 325 aaPredicted RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 KRT27Q7Z3Y8 459 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 DIS3L2Q8IYB7 885 aaKnown RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 MYOCDQ8IZQ8 938 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 TCP11Q8WWU5 503 aa4.35□□□□□ -1.71
UBR3-202ENST00000392632 ARHGEF2Q92974 986 aaKnown RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 OTUB1Q96FW1 271 aaPredicted RBP4.35□□□□□ -1.71
UBR3-202ENST00000392632 FOPNLQ96NB1 174 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms