RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CCND3P30281 292 aaPredicted RBP13.88□□□□□ -0.19
RFC4-202ENST00000392481 SLC16A2P36021 539 aa13.88□□□□□ -0.19
RFC4-202ENST00000392481 GPATCH4Q5T3I0 446 aaKnown RBP13.88□□□□□ -0.19
RFC4-202ENST00000392481 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
RFC4-202ENST00000392481 ANKLE1Q8NAG6 615 aa13.88□□□□□ -0.19
RFC4-202ENST00000392481 DDX11Q96FC9 970 aa13.88□□□□□ -0.19
RFC4-202ENST00000392481 AGBL1Q96MI9 1066 aa13.88□□□□□ -0.19
RFC4-202ENST00000392481 RANBP17Q9H2T7 1088 aaKnown RBP13.88□□□□□ -0.19
RFC4-202ENST00000392481 OGDHLQ9ULD0 1010 aa13.88□□□□□ -0.19
RFC4-202ENST00000392481 TAF6LQ9Y6J9 622 aa13.88□□□□□ -0.19
RFC4-202ENST00000392481 PLXNA1Q9UIW2 1896 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 CDC45O75419 566 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 CYBAP13498 195 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 SEC23AQ15436 765 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 LHX8Q68G74 356 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 CCDC174Q6PII3 467 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 RALYLQ86SE5 291 aaKnown RBP13.87□□□□□ -0.19
RFC4-202ENST00000392481 ANKRD35Q8N283 1001 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 NCOA7Q8NI08 942 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 ACAD9Q9H845 621 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 ANO2Q9NQ90 1003 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 PNMA2Q9UL42 364 aa13.87□□□□□ -0.19
RFC4-202ENST00000392481 MSCO60682 206 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 ICAM1P05362 532 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 SNAP25P60880 206 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 IFIT1BQ5T764 474 aaKnown RBP13.86□□□□□ -0.19
RFC4-202ENST00000392481 STOX1Q6ZVD7 989 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
RFC4-202ENST00000392481 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 TRERF1Q96PN7 1200 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 TINF2Q9BSI4 451 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 HOMER2Q9NSB8 354 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 RNF146Q9NTX7 359 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 NRBP1Q9UHY1 535 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 CCPG1Q9ULG6 757 aa13.86□□□□□ -0.19
RFC4-202ENST00000392481 SMCHD1A6NHR9 2005 aa13.85□□□□□ -0.19
RFC4-202ENST00000392481 ALAS1P13196 640 aa13.85□□□□□ -0.19
RFC4-202ENST00000392481 CNGA1P29973 690 aa13.85□□□□□ -0.19
RFC4-202ENST00000392481 SART3Q15020 963 aaKnown RBP13.85□□□□□ -0.19
RFC4-202ENST00000392481 NECTIN1Q15223 517 aa13.85□□□□□ -0.19
RFC4-202ENST00000392481 ASPRV1Q53RT3 343 aa13.85□□□□□ -0.19
RFC4-202ENST00000392481 ZNF467Q7Z7K2 595 aaPredicted RBP13.85□□□□□ -0.19
RFC4-202ENST00000392481 DDX20Q9UHI6 824 aaKnown RBP13.85□□□□□ -0.19
RFC4-202ENST00000392481 PFASO15067 1338 aa13.84□□□□□ -0.19
RFC4-202ENST00000392481 ERICH2A1L162 156 aa13.84□□□□□ -0.19
RFC4-202ENST00000392481 IFIT3O14879 490 aaKnown RBP13.84□□□□□ -0.19
RFC4-202ENST00000392481 SLC27A2O14975 620 aa13.84□□□□□ -0.19
RFC4-202ENST00000392481 SEPT4O43236 478 aa13.84□□□□□ -0.19
RFC4-202ENST00000392481 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
RFC4-202ENST00000392481 GOLGA8HP0CJ92 632 aa13.84□□□□□ -0.19
RFC4-202ENST00000392481 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
RFC4-202ENST00000392481 NECAB2Q7Z6G3 386 aa13.84□□□□□ -0.19
RFC4-202ENST00000392481 MB21D2Q8IYB1 491 aaPredicted RBP13.84□□□□□ -0.19
RFC4-202ENST00000392481 PAWRQ96IZ0 340 aaKnown RBP13.84□□□□□ -0.19
RFC4-202ENST00000392481 HTATIP2Q9BUP3 242 aa13.84□□□□□ -0.19
RFC4-202ENST00000392481 A1CFQ9NQ94 594 aaKnown RBP13.84□□□□□ -0.19
RFC4-202ENST00000392481 SYNGAP1Q96PV0 1343 aa13.84□□□□□ -0.19
RFC4-202ENST00000392481 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
RFC4-202ENST00000392481 PRAMEF19Q5SWL8 479 aa13.83□□□□□ -0.2
RFC4-202ENST00000392481 PRPF38BQ5VTL8 546 aaKnown RBP13.83□□□□□ -0.2
RFC4-202ENST00000392481 CREB3L3Q68CJ9 461 aa13.83□□□□□ -0.2
RFC4-202ENST00000392481 WDR19Q8NEZ3 1342 aa13.83□□□□□ -0.2
RFC4-202ENST00000392481 POTEB2H3BUK9 544 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 ANTXR2P58335 489 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 WTAPQ15007 396 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 MUM1L1Q5H9M0 696 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 TMEM67Q5HYA8 995 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 FAM133AQ8N9E0 248 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 IGDCC4Q8TDY8 1250 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 DIS3LQ8TF46 1054 aaKnown RBP13.82□□□□□ -0.2
RFC4-202ENST00000392481 FGD4Q96M96 766 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 MTA3Q9BTC8 594 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 UBA5Q9GZZ9 404 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 CNPY2Q9Y2B0 182 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 DNAH12Q6ZR08 3092 aa13.82□□□□□ -0.2
RFC4-202ENST00000392481 SNAI1O95863 264 aaPredicted RBP13.81□□□□□ -0.2
RFC4-202ENST00000392481 MCM5P33992 734 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 CNTN2Q02246 1040 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 CHST3Q7LGC8 479 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 ADGRF4Q8IZF3 695 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 CPVLQ9H3G5 476 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 CYP39A1Q9NYL5 469 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 FRMPD3Q5JV73 1810 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 MCM3APO60318 1980 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 PALM3A6NDB9 673 aaPredicted RBP13.81□□□□□ -0.2
RFC4-202ENST00000392481 ZNF865P0CJ78 1059 aaPredicted RBP13.81□□□□□ -0.2
RFC4-202ENST00000392481 TAL1P17542 331 aaPredicted RBP13.81□□□□□ -0.2
RFC4-202ENST00000392481 CDC37Q16543 378 aaPredicted RBP13.81□□□□□ -0.2
RFC4-202ENST00000392481 NSMFQ6X4W1 530 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 STAG2Q8N3U4 1231 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 ARRDC4Q8NCT1 418 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 CLEC4DQ8WXI8 215 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 DPF3Q92784 378 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 C11orf49Q9H6J7 331 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 SENP2Q9HC62 589 aa13.81□□□□□ -0.2
RFC4-202ENST00000392481 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
RFC4-202ENST00000392481 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms