RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 CAPN2P17655 700 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 ZNF543Q08ER8 600 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 MUM1L1Q5H9M0 696 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 CYB5R4Q7L1T6 521 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 ENAHQ8N8S7 591 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-204ENST00000392345 CHST13Q8NET6 341 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 RUFY2Q8WXA3 655 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 LENG1Q96BZ8 264 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-204ENST00000392345 DDX11Q96FC9 970 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 TTC14Q96N46 770 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 C11orf49Q9H6J7 331 aa16.36■□□□□ 0.21
CCDC57-204ENST00000392345 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
CCDC57-204ENST00000392345 ALPK3Q96L96 1907 aa16.35■□□□□ 0.21
CCDC57-204ENST00000392345 ZNF865P0CJ78 1059 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-204ENST00000392345 FDX1P10109 184 aa16.35■□□□□ 0.21
CCDC57-204ENST00000392345 STOX1Q6ZVD7 989 aa16.35■□□□□ 0.21
CCDC57-204ENST00000392345 ANKRD35Q8N283 1001 aa16.35■□□□□ 0.21
CCDC57-204ENST00000392345 TRERF1Q96PN7 1200 aa16.35■□□□□ 0.21
CCDC57-204ENST00000392345 ZSCAN10Q96SZ4 725 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-204ENST00000392345 ACAD9Q9H845 621 aa16.35■□□□□ 0.21
CCDC57-204ENST00000392345 A1CFQ9NQ94 594 aaKnown RBP16.35■□□□□ 0.21
CCDC57-204ENST00000392345 CCPG1Q9ULG6 757 aa16.35■□□□□ 0.21
CCDC57-204ENST00000392345 DDX49Q9Y6V7 483 aaKnown RBP16.35■□□□□ 0.21
CCDC57-204ENST00000392345 TNKSO95271 1327 aa16.35■□□□□ 0.21
CCDC57-204ENST00000392345 SNAI1O95863 264 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-204ENST00000392345 CNTN2Q02246 1040 aa16.34■□□□□ 0.21
CCDC57-204ENST00000392345 IQCA1Q86XH1 822 aa16.34■□□□□ 0.21
CCDC57-204ENST00000392345 DGKHQ86XP1 1220 aa16.34■□□□□ 0.21
CCDC57-204ENST00000392345 C7orf61Q8IZ16 206 aa16.34■□□□□ 0.21
CCDC57-204ENST00000392345 PNMA1Q8ND90 353 aa16.34■□□□□ 0.21
CCDC57-204ENST00000392345 KRT23Q9C075 422 aa16.34■□□□□ 0.21
CCDC57-204ENST00000392345 FBXO40Q9UH90 709 aa16.34■□□□□ 0.21
CCDC57-204ENST00000392345 ASTN1O14525 1302 aa16.34■□□□□ 0.21
CCDC57-204ENST00000392345 PLXNA1Q9UIW2 1896 aa16.33■□□□□ 0.21
CCDC57-204ENST00000392345 EVI5O60447 810 aa16.33■□□□□ 0.2
CCDC57-204ENST00000392345 MSCO60682 206 aa16.33■□□□□ 0.2
CCDC57-204ENST00000392345 ICAM1P05362 532 aa16.33■□□□□ 0.2
CCDC57-204ENST00000392345 LRRC26Q2I0M4 334 aa16.33■□□□□ 0.2
CCDC57-204ENST00000392345 GJC2Q5T442 439 aaPredicted RBP16.33■□□□□ 0.2
CCDC57-204ENST00000392345 FAM133AQ8N9E0 248 aa16.33■□□□□ 0.2
CCDC57-204ENST00000392345 ANKS1AQ92625 1134 aa16.33■□□□□ 0.2
CCDC57-204ENST00000392345 PURBQ96QR8 312 aaKnown RBP16.33■□□□□ 0.2
CCDC57-204ENST00000392345 CNNM2Q9H8M5 875 aa16.33■□□□□ 0.2
CCDC57-204ENST00000392345 RBM8AQ9Y5S9 174 aaKnown RBP16.33■□□□□ 0.2
CCDC57-204ENST00000392345 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
CCDC57-204ENST00000392345 ZNFX1Q9P2E3 1918 aaKnown RBP16.33■□□□□ 0.2
CCDC57-204ENST00000392345 SOWAHBA6NEL2 793 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 NFIBO00712 420 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 CEP290O15078 2479 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 ADCY6O43306 1168 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 COL9A3Q14050 684 aaPredicted RBP16.32■□□□□ 0.2
CCDC57-204ENST00000392345 SEC23AQ15436 765 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 MAMDC4Q6UXC1 1216 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 SYNGAP1Q96PV0 1343 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 ESYT1Q9BSJ8 1104 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 UBA5Q9GZZ9 404 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
CCDC57-204ENST00000392345 KAT14Q9H8E8 782 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 SENP2Q9HC62 589 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.32■□□□□ 0.2
CCDC57-204ENST00000392345 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
CCDC57-204ENST00000392345 ZMYND8Q9ULU4 1186 aaPredicted RBP16.32■□□□□ 0.2
CCDC57-204ENST00000392345 COLQQ9Y215 455 aaPredicted RBP16.32■□□□□ 0.2
CCDC57-204ENST00000392345 E7EWF7 191 aa16.31■□□□□ 0.2
CCDC57-204ENST00000392345 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
CCDC57-204ENST00000392345 DNM1LO00429 736 aa16.31■□□□□ 0.2
CCDC57-204ENST00000392345 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
CCDC57-204ENST00000392345 NT5C2P49902 561 aa16.31■□□□□ 0.2
CCDC57-204ENST00000392345 BMP2KLQ5H9B9 411 aa16.31■□□□□ 0.2
CCDC57-204ENST00000392345 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
CCDC57-204ENST00000392345 ARMCX2Q7L311 632 aa16.31■□□□□ 0.2
CCDC57-204ENST00000392345 ZNF467Q7Z7K2 595 aaPredicted RBP16.31■□□□□ 0.2
CCDC57-204ENST00000392345 MAP4K1Q92918 833 aa16.31■□□□□ 0.2
CCDC57-204ENST00000392345 CYP39A1Q9NYL5 469 aa16.31■□□□□ 0.2
CCDC57-204ENST00000392345 ZHX1Q9UKY1 873 aaPredicted RBP16.31■□□□□ 0.2
CCDC57-204ENST00000392345 LAMA3Q16787 3333 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 PGK1P00558 417 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 ATN1P54259 1190 aaPredicted RBP16.3■□□□□ 0.2
CCDC57-204ENST00000392345 LRRC41Q15345 812 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 CCDC178Q5BJE1 867 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 IFIT1BQ5T764 474 aaKnown RBP16.3■□□□□ 0.2
CCDC57-204ENST00000392345 NSMFQ6X4W1 530 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 CHST3Q7LGC8 479 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 CCDC144CPQ8IYA2 1237 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 MSL3Q8N5Y2 521 aaKnown RBP16.3■□□□□ 0.2
CCDC57-204ENST00000392345 CLEC4DQ8WXI8 215 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 SENP6Q9GZR1 1112 aaPredicted RBP16.3■□□□□ 0.2
CCDC57-204ENST00000392345 KATNBL1Q9H079 304 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 NR2E3Q9Y5X4 410 aa16.3■□□□□ 0.2
CCDC57-204ENST00000392345 LRRC37A2A6NM11 1700 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 RARBP10826 455 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 AKR1A1P14550 325 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 SYN1P17600 705 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 ANTXR2P58335 489 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 IRX5P78411 483 aaPredicted RBP16.29■□□□□ 0.2
CCDC57-204ENST00000392345 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms