RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 USP17L5A8MUK1 530 aa22.61■■□□□ 1.21
CSNK1D-203ENST00000392334 NPM3O75607 178 aaKnown RBP22.61■■□□□ 1.21
CSNK1D-203ENST00000392334 FAM53CQ9NYF3 392 aa22.61■■□□□ 1.21
CSNK1D-203ENST00000392334 MMP1P03956 469 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 HIRAP54198 1017 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 FANCCQ00597 558 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 PTPAQ15257 358 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 DPY19L2Q6NUT2 758 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 FOXP4Q8IVH2 680 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 IGKV6D-41A0A0C4DH26 115 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 CCP110O43303 1012 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 RAD21O60216 631 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 SYKP43405 635 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 MMP14P50281 582 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 SLC35G1Q2M3R5 365 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 HSD3B7Q9H2F3 369 aa22.6■■□□□ 1.21
CSNK1D-203ENST00000392334 FRMPD2Q68DX3 1309 aaPredicted RBP22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 CBFA2T2O43439 604 aa22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 TTLL1O95922 423 aa22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 NR5A1Q13285 461 aa22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 RRP1BQ14684 758 aaKnown RBP22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 KMT5BQ4FZB7 885 aa22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 DIS3L2Q8IYB7 885 aaKnown RBP22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 ELOA2Q8IYF1 753 aaPredicted RBP22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 OXER1Q8TDS5 423 aa22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 HACL1Q9UJ83 578 aa22.59■■□□□ 1.21
CSNK1D-203ENST00000392334 KLRF2D3W0D1 207 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 BIN1O00499 593 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 CYTH3O43739 400 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 NOVP48745 357 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 JAG1P78504 1218 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 MIGA2Q7L4E1 593 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 FAM151AQ8WW52 585 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 MAP3K14Q99558 947 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 VAT1LQ9HCJ6 419 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 PLIN4Q96Q06 1357 aa22.58■■□□□ 1.21
CSNK1D-203ENST00000392334 PALM3A6NDB9 673 aaPredicted RBP22.58■■□□□ 1.2
CSNK1D-203ENST00000392334 PARP1P09874 1014 aaKnown RBP22.58■■□□□ 1.2
CSNK1D-203ENST00000392334 SEPT2Q15019 361 aa22.58■■□□□ 1.2
CSNK1D-203ENST00000392334 RESP18Q5W5W9 173 aa22.58■■□□□ 1.2
CSNK1D-203ENST00000392334 TATDN1Q6P1N9 297 aa22.58■■□□□ 1.2
CSNK1D-203ENST00000392334 UBA5Q9GZZ9 404 aa22.58■■□□□ 1.2
CSNK1D-203ENST00000392334 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.58■■□□□ 1.25e-7■■■■■ 29.1
CSNK1D-203ENST00000392334 ATRNL1Q5VV63 1379 aa22.58■■□□□ 1.2
CSNK1D-203ENST00000392334 MYH8P13535 1937 aa22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 SAFBQ15424 915 aaKnown RBP eCLIP22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 SHC4Q6S5L8 630 aa22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 GPKOWQ92917 476 aaPredicted RBP eCLIP22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 CCDC17Q96LX7 622 aa22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 POLR2AP24928 1970 aaKnown RBP22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 CUTAO60888 179 aa22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 LMOD1P29536 600 aaPredicted RBP22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 MYL5Q02045 173 aa22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 FKBP1CQ5VVH2 108 aa22.57■■□□□ 1.2
CSNK1D-203ENST00000392334 GLTPD2A6NH11 291 aa22.56■■□□□ 1.2
CSNK1D-203ENST00000392334 PDHBP11177 359 aa22.56■■□□□ 1.2
CSNK1D-203ENST00000392334 SCG2P13521 617 aa22.56■■□□□ 1.2
CSNK1D-203ENST00000392334 MARCKSP29966 332 aaPredicted RBP22.56■■□□□ 1.2
CSNK1D-203ENST00000392334 RASA3Q14644 834 aa22.56■■□□□ 1.2
CSNK1D-203ENST00000392334 ABCB5Q2M3G0 1257 aa22.56■■□□□ 1.2
CSNK1D-203ENST00000392334 ANGEL2Q5VTE6 544 aaKnown RBP22.56■■□□□ 1.2
CSNK1D-203ENST00000392334 TMX1Q9H3N1 280 aa22.56■■□□□ 1.2
CSNK1D-203ENST00000392334 EEF2P13639 858 aaKnown RBP22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 XBP1P17861 261 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 ELF2Q15723 593 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 HOMER1Q86YM7 354 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 GPCPD1Q9NPB8 672 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 ZHX1Q9UKY1 873 aaPredicted RBP22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 PHLPP2Q6ZVD8 1323 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 GH2P01242 217 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 GNAQP50148 359 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 PFKFB3Q16875 520 aaPredicted RBP22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 FBXO38Q6PIJ6 1188 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 FAM83AQ86UY5 434 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 METTL16Q86W50 562 aaKnown RBP22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 FCHSD1Q86WN1 690 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 NOSTRINQ8IVI9 506 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 KRT222Q8N1A0 295 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 PHF20Q9BVI0 1012 aa22.55■■□□□ 1.2
CSNK1D-203ENST00000392334 ADARB2Q9NS39 739 aaKnown RBP22.54■■□□□ 1.2
CSNK1D-203ENST00000392334 GGA3Q9NZ52 723 aa22.54■■□□□ 1.2
CSNK1D-203ENST00000392334 ADAMTS3O15072 1205 aa22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 ATP2B1P20020 1258 aa22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 PGAP2Q9UHJ9 254 aa22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 H2AFXP16104 143 aaPredicted RBP22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 UBASH3AP57075 661 aa22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 SYT10Q6XYQ8 523 aa22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 KCTD1Q719H9 257 aa22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 SIAH1Q8IUQ4 282 aa22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 VSTM4Q8IW00 320 aa22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 L3MBTL3Q96JM7 780 aaPredicted RBP22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 DEFB129Q9H1M3 183 aa22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 ZC3H4Q9UPT8 1303 aaKnown RBP22.53■■□□□ 1.2
CSNK1D-203ENST00000392334 FAM205CA6NFA0 338 aa22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 ATP1A3P13637 1013 aa22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 NLRP5P59047 1200 aa22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 ETF1P62495 437 aaKnown RBP22.52■■□□□ 1.2
CSNK1D-203ENST00000392334 ICA1Q05084 483 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms