RNA–Protein interactions for RNA: ENST00000383866.1

RNU6-47P-201, Transcript of RNA, U6 small nuclear 47, pseudogene, humanhuman

BASIC

Gene RNU6-47P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-47P-201ENST00000383866 ZSCAN29Q8IWY8 852 aaPredicted RBP3.66□□□□□ -1.82
RNU6-47P-201ENST00000383866 CCDC82Q8N4S0 544 aa3.66□□□□□ -1.82
RNU6-47P-201ENST00000383866 KIF2CQ99661 725 aa3.66□□□□□ -1.82
RNU6-47P-201ENST00000383866 VPS11Q9H270 941 aa3.66□□□□□ -1.82
RNU6-47P-201ENST00000383866 IMPACTQ9P2X3 320 aa3.66□□□□□ -1.82
RNU6-47P-201ENST00000383866 DBR1Q9UK59 544 aaKnown RBP3.66□□□□□ -1.82
RNU6-47P-201ENST00000383866 TSC22D4Q9Y3Q8 395 aa3.66□□□□□ -1.82
RNU6-47P-201ENST00000383866 ZNF536O15090 1300 aa3.66□□□□□ -1.82
RNU6-47P-201ENST00000383866 TFE3P19532 575 aaPredicted RBP3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 EIF4BP23588 611 aaKnown RBP3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 TBC1D10BQ4KMP7 808 aaPredicted RBP3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 BORAQ6PGQ7 559 aa3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 TMC3Q7Z5M5 1100 aa3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 CCDC84Q86UT8 332 aaPredicted RBP3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 JAMLQ86YT9 394 aa3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 Q8N1X5 172 aa3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 RETREG2Q8NC44 543 aa3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 PCED1AQ9H1Q7 454 aa3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 ERVK13-1Q9NX77 482 aa3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 REV1Q9UBZ9 1251 aa3.65□□□□□ -1.83
RNU6-47P-201ENST00000383866 SOWAHDA6NJG2 315 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 CHURC1-FNTBB4DL54 471 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 SRGAP3O43295 1099 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 SIGLEC6O43699 453 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 PRAMEF1O95521 474 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 ATF2P15336 505 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 FBLN1P23142 703 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 RAD51AP2Q09MP3 1159 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 NBPF9Q3BBW0 867 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 LGI4Q8N135 537 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 NAT16Q8N8M0 369 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 ANTXR1Q9H6X2 564 aa3.64□□□□□ -1.83
RNU6-47P-201ENST00000383866 RGS13O14921 159 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 DBHP09172 617 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 FMR1Q06787 632 aaKnown RBP eCLIP3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 HLA-DQA1Q5Y7H0 255 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 BICRALQ6AI39 1079 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 B3GNT8Q7Z7M8 397 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 ZNF761Q86XN6 746 aaPredicted RBP3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 JMJD8Q96S16 334 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 SETDB2Q96T68 719 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 CHST7Q9NS84 486 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 ST6GALNAC2Q9UJ37 374 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 PRR36Q9H6K5 1346 aa3.63□□□□□ -1.83
RNU6-47P-201ENST00000383866 F8W031 263 aaPredicted RBP3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 SMARCA5O60264 1052 aaPredicted RBP3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 ZNF205O95201 554 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 HTR3BO95264 441 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 RAG1P15918 1043 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 BMP8BP34820 402 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 TGFB2P61812 414 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 PRR5P85299 388 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 MVKQ03426 396 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 DLX2Q07687 328 aaPredicted RBP3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 ALG3Q92685 438 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 ZNF747Q9BV97 191 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 C11orf21Q9P2W6 132 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 WWC3Q9ULE0 1092 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 HS3ST3A1Q9Y663 406 aa3.62□□□□□ -1.83
RNU6-47P-201ENST00000383866 AMHP03971 560 aa3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 ASGR2P07307 311 aa3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 PDE4CQ08493 712 aa3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 SNW1Q13573 536 aaKnown RBP3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 NBPF12Q5TAG4 269 aaPredicted RBP3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 USP48Q86UV5 1035 aa3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 RGS22Q8NE09 1264 aa3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 ADAMTS17Q8TE56 1095 aa3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 PDLIM7Q9NR12 457 aa3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 AP5S1Q9NUS5 200 aa3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 INVSQ9Y283 1065 aa3.61□□□□□ -1.83
RNU6-47P-201ENST00000383866 MEIS1O00470 390 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 VAV1P15498 845 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 GNA15P30679 374 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 MC3RP41968 323 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 SURF1Q15526 300 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 SMN1Q16637 294 aaKnown RBP3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 RGL3Q3MIN7 710 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 CABP7Q86V35 215 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 GATAD2BQ8WXI9 593 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 ZBTB8AQ96BR9 441 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 KLC2Q9H0B6 622 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 TLR6Q9Y2C9 796 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 HCFC2Q9Y5Z7 792 aa3.6□□□□□ -1.83
RNU6-47P-201ENST00000383866 CLEC3AO75596 197 aa3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 CORO7P57737 925 aa3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 PURAQ00577 322 aaKnown RBP3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 KLF10Q13118 480 aa3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 FAM26FQ5R3K3 315 aa3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 CYP2R1Q6VVX0 501 aa3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 BNC2Q6ZN30 1099 aaPredicted RBP3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 SMARCC2Q8TAQ2 1214 aa3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 NOC4LQ9BVI4 516 aaKnown RBP3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 DEF6Q9H4E7 631 aa3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 PCDH18Q9HCL0 1135 aa3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 PCDHB12Q9Y5F1 795 aa3.59□□□□□ -1.83
RNU6-47P-201ENST00000383866 FAM221AA4D161 298 aa3.58□□□□□ -1.84
RNU6-47P-201ENST00000383866 MROH6A6NGR9 719 aa3.58□□□□□ -1.84
RNU6-47P-201ENST00000383866 UBOX5O94941 541 aa3.58□□□□□ -1.84
RNU6-47P-201ENST00000383866 GSNP06396 782 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms