RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 SERPINB13Q9UIV8 391 aa17.61■□□□□ 0.41
BRF1-203ENST00000379937 RBM28Q9NW13 759 aaKnown RBP17.61■□□□□ 0.41
BRF1-203ENST00000379937 KRT18P05783 430 aaKnown RBP17.6■□□□□ 0.41
BRF1-203ENST00000379937 ECE1P42892 770 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 RHBDL3P58872 404 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 TBC1D5Q92609 795 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 WDR24Q96S15 920 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 GSTO1P78417 241 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 ATL3Q6DD88 541 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 CYP2W1Q8TAV3 490 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 REXO1Q8N1G1 1221 aaKnown RBP17.6■□□□□ 0.41
BRF1-203ENST00000379937 CCDC12Q8WUD4 166 aaPredicted RBP17.6■□□□□ 0.41
BRF1-203ENST00000379937 CAPZA3Q96KX2 299 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 FAM207AQ9NSI2 230 aaPredicted RBP17.6■□□□□ 0.41
BRF1-203ENST00000379937 PCDHA4Q9UN74 947 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 SHANK3Q9BYB0 1731 aa17.6■□□□□ 0.41
BRF1-203ENST00000379937 CFBP00751 764 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 GH2P01242 217 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 ATP2B4P23634 1241 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 RNASE9P60153 205 aaKnown RBP17.59■□□□□ 0.41
BRF1-203ENST00000379937 RBM6P78332 1123 aaKnown RBP17.59■□□□□ 0.41
BRF1-203ENST00000379937 MNS1Q8NEH6 495 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 TCP11L1Q9NUJ3 509 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 GUCA1BQ9UMX6 200 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 PHLPP1O60346 1717 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 NUP188Q5SRE5 1749 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 B4DLN1 442 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 CYP27A1Q02318 531 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 KIF18AQ8NI77 898 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 KIFC2Q96AC6 838 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 SLFN14P0C7P3 912 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 FXR1P51114 621 aaKnown RBP eCLIP17.59■□□□□ 0.41
BRF1-203ENST00000379937 RC3H1Q5TC82 1133 aaKnown RBP17.59■□□□□ 0.41
BRF1-203ENST00000379937 CABP7Q86V35 215 aa17.59■□□□□ 0.41
BRF1-203ENST00000379937 NEMFO60524 1076 aa17.58■□□□□ 0.41
BRF1-203ENST00000379937 SEC31AO94979 1220 aaKnown RBP17.58■□□□□ 0.41
BRF1-203ENST00000379937 MATR3P43243 847 aaKnown RBP eCLIP17.58■□□□□ 0.411e-8■■■■□ 25.4
BRF1-203ENST00000379937 CRKP46108 304 aa17.58■□□□□ 0.41
BRF1-203ENST00000379937 STK4Q13043 487 aa17.58■□□□□ 0.41
BRF1-203ENST00000379937 UBE2Q2Q8WVN8 375 aa17.58■□□□□ 0.41
BRF1-203ENST00000379937 TEKT1Q969V4 418 aa17.58■□□□□ 0.41
BRF1-203ENST00000379937 PRMT6Q96LA8 375 aaPredicted RBP17.58■□□□□ 0.41
BRF1-203ENST00000379937 EEF2P13639 858 aaKnown RBP17.58■□□□□ 0.4
BRF1-203ENST00000379937 MTIF2P46199 727 aaKnown RBP17.58■□□□□ 0.4
BRF1-203ENST00000379937 PRR16Q569H4 304 aa17.58■□□□□ 0.4
BRF1-203ENST00000379937 ADGRF4Q8IZF3 695 aa17.58■□□□□ 0.4
BRF1-203ENST00000379937 H0YIN7 160 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 RPN1P04843 607 aaKnown RBP17.57■□□□□ 0.4
BRF1-203ENST00000379937 SRGNP10124 158 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 NAP1L1P55209 391 aaKnown RBP17.57■□□□□ 0.4
BRF1-203ENST00000379937 SNX29Q8TEQ0 813 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 ELMO3Q96BJ8 720 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 CHP1Q99653 195 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 GJA3Q9Y6H8 435 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 STXBP3O00186 592 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 DDAH1O94760 285 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 MDM2Q00987 491 aaPredicted RBP17.57■□□□□ 0.4
BRF1-203ENST00000379937 KMT5BQ4FZB7 885 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 CCDC34Q96HJ3 373 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 CSRNP1Q96S65 589 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 FBXO28Q9NVF7 368 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 COL16A1Q07092 1604 aaPredicted RBP17.57■□□□□ 0.4
BRF1-203ENST00000379937 POLR3GO15318 223 aaPredicted RBP17.57■□□□□ 0.4
BRF1-203ENST00000379937 ZMYND10O75800 440 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 PDHBP11177 359 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 JAG1P78504 1218 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 LRWD1Q9UFC0 647 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 TUBE1Q9UJT0 475 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 PCDHA1Q9Y5I3 950 aa17.57■□□□□ 0.4
BRF1-203ENST00000379937 ZBTB39O15060 712 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 ECE2O60344 883 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 TPM3P06753 285 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 ZNF76P36508 570 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 NCBP1Q09161 790 aaKnown RBP17.56■□□□□ 0.4
BRF1-203ENST00000379937 NONOQ15233 471 aaKnown RBP eCLIP17.56■□□□□ 0.45e-6■■■■□ 20.4
BRF1-203ENST00000379937 KCNK18Q7Z418 384 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 KSR1Q8IVT5 923 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 NLRC4Q9NPP4 1024 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 E9PMD0 336 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 BBOX1O75936 387 aa17.56■□□□□ 0.4
BRF1-203ENST00000379937 CERKLQ49MI3 558 aaPredicted RBP17.56■□□□□ 0.4
BRF1-203ENST00000379937 MRPL44Q9H9J2 332 aaKnown RBP17.56■□□□□ 0.4
BRF1-203ENST00000379937 MACROD2A1Z1Q3 448 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 PEX10O60683 326 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 MORC3Q14149 939 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 KRT31Q15323 416 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 ZNF569Q5MCW4 686 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 SPECC1LQ69YQ0 1117 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 RDH13Q8NBN7 331 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 GLIS2Q9BZE0 524 aaPredicted RBP17.55■□□□□ 0.4
BRF1-203ENST00000379937 C6orf50Q9HD87 102 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 ANAPC4Q9UJX5 808 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 RHOXF2BP0C7M4 288 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 KRT9P35527 623 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 CALCRLQ16602 461 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 CSGALNACT2Q8N6G5 542 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 RHOXF2Q9BQY4 288 aa17.55■□□□□ 0.4
BRF1-203ENST00000379937 ERICH4A6NGS2 130 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms