RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 XPO7Q9UIA9 1087 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CEP131Q9UPN4 1083 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PHLPP1O60346 1717 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 A0A087WUV0 522 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 SPDYE3A6NKU9 549 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 BBOX1O75936 387 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 MYBL1P10243 752 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PSMD7P51665 324 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 SMTNP53814 917 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PDE4DQ08499 809 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 ITGB3BPQ13352 177 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CUL3Q13618 768 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 LETM2Q2VYF4 491 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CCDC84Q86UT8 332 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 SLC44A2Q8IWA5 706 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CDC26Q8NHZ8 85 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CUL5Q93034 780 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 RBM41Q96IZ5 413 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 RNPC3Q96LT9 517 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 DNAJC25Q9H1X3 360 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 DDX21Q9NR30 783 aaKnown RBP eCLIP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 DNAI1Q9UI46 699 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 GPATCH8Q9UKJ3 1502 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CCDC7Q96M83 1385 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 GOLGA6L9A6NEM1 432 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 AP3B1O00203 1094 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 FOXN3O00409 490 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 NBNO60934 754 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 POTEIP0CG38 1075 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PAPOLAP51003 745 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 SMAD4Q13485 552 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 ITGA7Q13683 1181 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 UBE4AQ14139 1066 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 SF3B3Q15393 1217 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CLUL1Q15846 466 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 BBS9Q3SYG4 887 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 TMTC4Q5T4D3 741 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 GIMAP1Q8WWP7 306 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 RUNDC1Q96C34 613 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PAWRQ96IZ0 340 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 VPS33BQ9H267 617 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 TSPY26PQ9H489 355 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 UBN1Q9NPG3 1134 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 TRPV5Q9NQA5 729 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 GPHNQ9NQX3 736 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PCSK1NQ9UHG2 260 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 R3HDM2Q9Y2K5 976 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 IGSF1Q8N6C5 1336 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 A2ML1A8K2U0 1454 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 MAGI2Q86UL8 1455 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PPEF1O14829 653 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 DIAPH2O60879 1101 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PRPF40AO75400 957 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 TFRCP02786 760 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 RPN1P04843 607 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 HLA-DOAP06340 250 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 SLC5A1P13866 664 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PIP4K2AP48426 406 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 MTX1Q13505 466 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 TNNI3KQ59H18 835 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 PDXDC1Q6P996 788 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 C11orf74Q86VG3 221 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 GIMAP8Q8ND71 665 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 DHTKD1Q96HY7 919 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 NELL2Q99435 816 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 NSFL1CQ9UNZ2 370 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 AKR1B15C9JRZ8 316 aaPredicted RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 GOLGA8MH3BSY2 632 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 TIPRLO75663 272 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 ANXA13P27216 316 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 ACTN2P35609 894 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 MARSP56192 900 aaKnown RBP3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CORO7P57737 925 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 RABGGTAQ92696 567 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 RILPL2Q969X0 211 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 GORASP1Q9BQQ3 440 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CLSTN2Q9H4D0 955 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 USH1CQ9Y6N9 552 aa3.97□□□□□ -1.77
PRKD3-202ENST00000379066 CPS1P31327 1500 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 TRIM43BA6NCK2 446 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 ONECUT3O60422 494 aaPredicted RBP3.96□□□□□ -1.77
PRKD3-202ENST00000379066 LGR5O75473 907 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 GCP02774 474 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 GLULP15104 373 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 RASA1P20936 1047 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 KRT20P35900 424 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 BASP1P80723 227 aaKnown RBP3.96□□□□□ -1.77
PRKD3-202ENST00000379066 ACTN3Q08043 901 aaPredicted RBP3.96□□□□□ -1.77
PRKD3-202ENST00000379066 CNGA3Q16281 694 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 RAB11FIP4Q86YS3 637 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 TMEM151BQ8IW70 566 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 MFN1Q8IWA4 741 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 SPATA5Q8NB90 893 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 CCDC110Q8TBZ0 833 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 RAET1EQ8TD07 263 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 LMBR1Q8WVP7 490 aa3.96□□□□□ -1.77
PRKD3-202ENST00000379066 JPH3Q8WXH2 748 aaPredicted RBP3.96□□□□□ -1.77
PRKD3-202ENST00000379066 ABTB1Q969K4 478 aaPredicted RBP3.96□□□□□ -1.77
PRKD3-202ENST00000379066 ZNF496Q96IT1 587 aaPredicted RBP3.96□□□□□ -1.77
PRKD3-202ENST00000379066 VPS50Q96JG6 964 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms