RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 BTNL9Q6UXG8 535 aa22.33■■□□□ 1.17
TMEM88B-201ENST00000378821 DCAF4Q8WV16 495 aa22.33■■□□□ 1.17
TMEM88B-201ENST00000378821 XPNPEP3Q9NQH7 507 aa22.33■■□□□ 1.17
TMEM88B-201ENST00000378821 DIAPH3Q9NSV4 1193 aa22.33■■□□□ 1.17
TMEM88B-201ENST00000378821 CNPY2Q9Y2B0 182 aa22.33■■□□□ 1.17
TMEM88B-201ENST00000378821 SOX1O00570 391 aaPredicted RBP22.32■■□□□ 1.16
TMEM88B-201ENST00000378821 ATN1P54259 1190 aaPredicted RBP22.32■■□□□ 1.16
TMEM88B-201ENST00000378821 RTP1P59025 263 aa22.32■■□□□ 1.16
TMEM88B-201ENST00000378821 LRIT3Q3SXY7 679 aa22.32■■□□□ 1.16
TMEM88B-201ENST00000378821 KCTD1Q719H9 257 aa22.32■■□□□ 1.16
TMEM88B-201ENST00000378821 ANKRD35Q8N283 1001 aa22.32■■□□□ 1.16
TMEM88B-201ENST00000378821 FAM133AQ8N9E0 248 aa22.32■■□□□ 1.16
TMEM88B-201ENST00000378821 PRR12Q9ULL5 1215 aa22.32■■□□□ 1.16
TMEM88B-201ENST00000378821 LTBP2Q14767 1821 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 HIP1O00291 1037 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 ADAMTS4O75173 837 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 TOP1P11387 765 aaKnown RBP22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 ADCYAP1R1P41586 468 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 NT5C2P49902 561 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 AKNAD1Q5T1N1 836 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 GPR153Q6NV75 609 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 CWC27Q6UX04 472 aaKnown RBP22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 TDHQ8IZJ6 230 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 AGBL1Q96MI9 1066 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 TTC14Q96N46 770 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 TMEM47Q9BQJ4 181 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 ACAD9Q9H845 621 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 LAMA3Q16787 3333 aa22.31■■□□□ 1.16
TMEM88B-201ENST00000378821 MCM3APO60318 1980 aa22.3■■□□□ 1.16
TMEM88B-201ENST00000378821 RASGRP2Q7LDG7 609 aa22.3■■□□□ 1.16
TMEM88B-201ENST00000378821 RNF180Q86T96 592 aa22.3■■□□□ 1.16
TMEM88B-201ENST00000378821 KLHDC9Q8NEP7 349 aa22.3■■□□□ 1.16
TMEM88B-201ENST00000378821 TSEN34Q9BSV6 310 aaKnown RBP22.3■■□□□ 1.16
TMEM88B-201ENST00000378821 KATNBL1Q9H079 304 aa22.3■■□□□ 1.16
TMEM88B-201ENST00000378821 ABHD16BQ9H3Z7 469 aa22.3■■□□□ 1.16
TMEM88B-201ENST00000378821 FAM184BQ9ULE4 1060 aa22.3■■□□□ 1.16
TMEM88B-201ENST00000378821 PGK1P00558 417 aa22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 SLC4A3P48751 1232 aa22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 ACVR2BQ13705 512 aa22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 CCSAPQ6IQ19 270 aaPredicted RBP22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 MFSD6Q6ZSS7 791 aa22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 TBC1D10CQ8IV04 446 aa22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 UBE2OQ9C0C9 1292 aaKnown RBP22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 RANBP17Q9H2T7 1088 aaKnown RBP22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 A1CFQ9NQ94 594 aaKnown RBP22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 RNF146Q9NTX7 359 aa22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.29■■□□□ 1.16
TMEM88B-201ENST00000378821 DUSP11O75319 330 aaKnown RBP22.28■■□□□ 1.16
TMEM88B-201ENST00000378821 HAND2P61296 217 aa22.28■■□□□ 1.16
TMEM88B-201ENST00000378821 NKX3-2P78367 333 aa22.28■■□□□ 1.16
TMEM88B-201ENST00000378821 RRP12Q5JTH9 1297 aaKnown RBP22.28■■□□□ 1.16
TMEM88B-201ENST00000378821 IL25Q9H293 177 aa22.28■■□□□ 1.16
TMEM88B-201ENST00000378821 ICAM1P05362 532 aa22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 SNHG28P0DPA3 235 aa22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 CST5P28325 142 aaPredicted RBP22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 MDM2Q00987 491 aaPredicted RBP22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 CNTN2Q02246 1040 aa22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 IKQ13123 557 aaPredicted RBP22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 ARMCX2Q7L311 632 aa22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 LRCH3Q96II8 777 aa22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 TRERF1Q96PN7 1200 aa22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 RNF41Q9H4P4 317 aaPredicted RBP22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 TOMM22Q9NS69 142 aa22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 HOMER2Q9NSB8 354 aa22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 SYNRGQ9UMZ2 1314 aa22.27■■□□□ 1.16
TMEM88B-201ENST00000378821 SOWAHBA6NEL2 793 aa22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 PDHBP11177 359 aa22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 TRIM60Q495X7 471 aa22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 TTBK2Q6IQ55 1244 aa22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 CCDC144CPQ8IYA2 1237 aa22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 FERMT2Q96AC1 680 aa22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 LENG1Q96BZ8 264 aaPredicted RBP22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 DSCC1Q9BVC3 393 aa22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 UPF3AQ9H1J1 476 aaKnown RBP22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 ATP11BQ9Y2G3 1177 aa22.26■■□□□ 1.15
TMEM88B-201ENST00000378821 LCTP09848 1927 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 A0A1W2PQ45 241 aaPredicted RBP22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 A0A1W2PQY0 241 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 POTEB2H3BUK9 544 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 ZNF213O14771 459 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 ADCY6O43306 1168 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 ALAS1P13196 640 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 CHMLP26374 656 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 CCDC144BQ3MJ40 725 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 MUM1L1Q5H9M0 696 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 CHMP4CQ96CF2 233 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 CYP39A1Q9NYL5 469 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 ZHX1Q9UKY1 873 aaPredicted RBP22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 ISY1Q9ULR0 285 aaKnown RBP22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 ASTN1O14525 1302 aa22.25■■□□□ 1.15
TMEM88B-201ENST00000378821 MOXD2PA6NHM9 499 aa22.24■■□□□ 1.15
TMEM88B-201ENST00000378821 MYCNP04198 464 aaPredicted RBP22.24■■□□□ 1.15
TMEM88B-201ENST00000378821 ACLYP53396 1101 aa22.24■■□□□ 1.15
TMEM88B-201ENST00000378821 GJA9P57773 515 aa22.24■■□□□ 1.15
TMEM88B-201ENST00000378821 SNAP25P60880 206 aa22.24■■□□□ 1.15
TMEM88B-201ENST00000378821 CCDC96Q2M329 555 aa22.24■■□□□ 1.15
TMEM88B-201ENST00000378821 SYDE2Q5VT97 1194 aa22.24■■□□□ 1.15
TMEM88B-201ENST00000378821 ERICH6BQ5W0A0 696 aa22.24■■□□□ 1.15
TMEM88B-201ENST00000378821 CCDC174Q6PII3 467 aa22.24■■□□□ 1.15
TMEM88B-201ENST00000378821 DGKHQ86XP1 1220 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms