RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 M0R2C6 588 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 H2AFXP16104 143 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 ACBD5Q5T8D3 534 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 USP33Q8TEY7 942 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 PALD1Q9ULE6 856 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 PPEF1O14829 653 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 PPARDQ03181 441 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 OLFM4Q6UX06 510 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 CLEC4GQ6UXB4 293 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 FILIP1Q7Z7B0 1213 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 XIRP2A4UGR9 3374 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 EIF3JO75822 258 aaKnown RBP12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 INPP5BP32019 993 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 RUFY3Q7L099 469 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 HEATR3Q7Z4Q2 680 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 NEK9Q8TD19 979 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 FBXO41Q8TF61 875 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 CLIP3Q96DZ5 547 aa12.1□□□□□ -0.47
PCDHGA1-201ENST00000378105 COL4A5P29400 1685 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 CCDC70Q6NSX1 233 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 OLFML1Q6UWY5 402 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 C17orf50Q8WW18 174 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 HAUS7Q99871 368 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 UNC45AQ9H3U1 944 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 LAMA4Q16363 1823 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 PROM2Q8N271 834 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 TCP11Q8WWU5 503 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 CABS1Q96KC9 395 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 SUN2Q9UH99 717 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 hCG_1642624A0A1W2PR95 340 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 ZEB2O60315 1214 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 RAD17O75943 681 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 POTEAQ6S8J7 498 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 TTC6Q86TZ1 520 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 LMBR1Q8WVP7 490 aa12.09□□□□□ -0.47
PCDHGA1-201ENST00000378105 RTN2O75298 545 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 UBE4AQ14139 1066 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 PALB2Q86YC2 1186 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 SDR16C5Q8N3Y7 309 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 MRGBPQ9NV56 204 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 PUF60Q9UHX1 559 aaKnown RBP12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 TBC1D8O95759 1140 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 GJA8P48165 433 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 CACTINQ8WUQ7 758 aaKnown RBP12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 SNX21Q969T3 373 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 SPATA17Q96L03 361 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 LMOD1P29536 600 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 DIXDC1Q155Q3 683 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 USP40Q9NVE5 1235 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 XDHP47989 1333 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 AOX1Q06278 1338 aa12.08□□□□□ -0.48
PCDHGA1-201ENST00000378105 IQCB1Q15051 598 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 DLGAP5Q15398 846 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 SPATA7Q9P0W8 599 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 MYH13Q9UKX3 1938 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 NDUFB5O43674 189 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 OTUD7BQ6GQQ9 843 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 FAM173BQ6P4H8 233 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 CNNM3Q8NE01 707 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 CXorf38Q8TB03 319 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 CTNNBL1Q8WYA6 563 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 NUP62CLQ9H1M0 184 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 FAM169AQ9Y6X4 670 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 hCG_2014768A0A024R1R8 64 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 IMPDH2P12268 514 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 POLA2Q14181 598 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 LRRC23Q53EV4 343 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 FAM117BQ6P1L5 589 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 ZNF589Q86UQ0 364 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 LUZP1Q86V48 1076 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 CEP57L1Q8IYX8 460 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 FAM81BQ96LP2 452 aa12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 FBXO9Q9UK97 447 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA1-201ENST00000378105 PTPDC1A2A3K4 754 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 HSPD1P10809 573 aaKnown RBP12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 CLRN2A0PK11 232 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 BBOX1O75936 387 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 FGAP02671 866 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 DYNLL1P63167 89 aaKnown RBP12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 R3HDM1Q15032 1099 aaKnown RBP12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 TBC1D31Q96DN5 1066 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 SCAND2PQ9GZW5 306 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 N6AMT1Q9Y5N5 214 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 CIAO1O76071 339 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 PDHBP11177 359 aa12.06□□□□□ -0.48
PCDHGA1-201ENST00000378105 FAM114A1Q8IWE2 563 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms