RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 EDRF1Q3B7T1 1238 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 EFHD1Q9BUP0 239 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 NOC4LQ9BVI4 516 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 BICC1Q9H694 974 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 V9GY48 417 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 DTNBP1Q96EV8 351 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 NACC1Q96RE7 527 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 TTC37Q6PGP7 1564 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 TSPY3P0CV98 308 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 TSPY8P0CW00 308 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 HIBADHP31937 336 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 RPS8P62241 208 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 ME3Q16798 604 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 FERMT3Q86UX7 667 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 PI4K2BQ8TCG2 481 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 SORCS3Q9UPU3 1222 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 BANK1Q8NDB2 785 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 SNAPC5O75971 98 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 SFMBT2Q5VUG0 894 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 ZNF513Q8N8E2 541 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 GIMAP8Q8ND71 665 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 BTNL10A8MVZ5 291 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 CYP2C19P33261 490 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 ARHGEF37A1IGU5 675 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 RPLP2P05387 115 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 KRT15P19012 456 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 ACBD5Q5T8D3 534 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 HLTFQ14527 1009 aaKnown RBP eCLIP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 RC3H1Q5TC82 1133 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 KIAA1257Q9ULG3 409 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 PPFIA2O75334 1257 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 ESYT2A0FGR8 921 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 REXO1Q8N1G1 1221 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 CDHR2Q9BYE9 1310 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 GSPT1P15170 499 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 MYOCDQ8IZQ8 938 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 CAPS2Q9BXY5 557 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 A0A0G2JS52 829 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 ZBTB17Q13105 803 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 SYNCQ9H7C4 482 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 RBBP5Q15291 538 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 SMC6Q96SB8 1091 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 LONRF2Q1L5Z9 754 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 ZC3H12CQ9C0D7 883 aaKnown RBP5.43□□□□□ -1.54
PCDH9-201ENST00000377861 MMS22LQ6ZRQ5 1243 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 MAGEA1P43355 309 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 FRMD5Q7Z6J6 570 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 ABCF3Q9NUQ8 709 aa5.43□□□□□ -1.54
PCDH9-201ENST00000377861 H2AFZP0C0S5 128 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 H2AFVQ71UI9 128 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 TRAPPC11Q7Z392 1133 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 AOPEPQ8N6M6 819 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 MYD88Q99836 296 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 RSPH10B2B2RC85 870 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 RSPH10BP0C881 870 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 LTV1Q96GA3 475 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 VPS33BQ9H267 617 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 STAMBPL1Q96FJ0 436 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 RSPH14Q9UHP6 348 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 PFDN6O15212 129 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 CSF1RP07333 972 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 TRIM72Q6ZMU5 477 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 MID2Q9UJV3 735 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 CCNJLQ8IV13 435 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 RPS6KC1Q96S38 1066 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 CPSF2Q9P2I0 782 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 BIN2Q9UBW5 565 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 LAMC1P11047 1609 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 AP3B2Q13367 1082 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 EMC10Q5UCC4 262 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 ATP8B3O60423 1300 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 GOLGA8CPA6NN73 597 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 NDUFA10O95299 355 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 PARP1P09874 1014 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 SWT1Q5T5J6 900 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 C16orf71Q8IYS4 520 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 PPP1R14BQ96C90 147 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 VCX3AQ9NNX9 186 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 A0A0A6YYK5 440 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 MMP1P03956 469 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 DHX34Q14147 1143 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 VEZTQ9HBM0 779 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 SPDYE3A6NKU9 549 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 HADHAP40939 763 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 NRXN1Q9ULB1 1477 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 ATXN2Q99700 1313 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 IRX3P78415 501 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 RBM10P98175 930 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 RIBC1Q8N443 379 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 SLC26A6Q9BXS9 759 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 BSDC1Q9NW68 430 aaPredicted RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 MAPK13O15264 365 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 LDHBP07195 334 aaKnown RBP5.42□□□□□ -1.54
PCDH9-201ENST00000377861 TCP11X2Q5H9J9 407 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 EP400NLQ6ZTU2 488 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 SSX2IPQ9Y2D8 614 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 FOXO3O43524 673 aa5.42□□□□□ -1.54
PCDH9-201ENST00000377861 CCNE1P24864 410 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms