RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CYP2C8P10632 490 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 SP3Q02447 781 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 TREML2Q5T2D2 321 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 USP28Q96RU2 1077 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 POLR3EQ9NVU0 708 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 ECM2O94769 699 aaPredicted RBP24.35■■□□□ 1.49
HLA-C-201ENST00000376228 TTLL1O95922 423 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 ZNF445P59923 1031 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 CAP1Q01518 475 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 MTMR2Q13614 643 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 CPA4Q9UI42 421 aa24.35■■□□□ 1.49
HLA-C-201ENST00000376228 BAZ2BQ9UIF8 2168 aaKnown RBP24.34■■□□□ 1.49
HLA-C-201ENST00000376228 YEATS4O95619 227 aa24.34■■□□□ 1.49
HLA-C-201ENST00000376228 NASPP49321 788 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-201ENST00000376228 PFKFB3Q16875 520 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-201ENST00000376228 ABCB5Q2M3G0 1257 aa24.34■■□□□ 1.49
HLA-C-201ENST00000376228 SPZ1Q9BXG8 430 aa24.34■■□□□ 1.49
HLA-C-201ENST00000376228 TMEM63CQ9P1W3 806 aa24.34■■□□□ 1.49
HLA-C-201ENST00000376228 CENPFP49454 3210 aa24.34■■□□□ 1.49
HLA-C-201ENST00000376228 HTTP42858 3142 aa24.34■■□□□ 1.49
HLA-C-201ENST00000376228 SNHG28P0DPA3 235 aa24.33■■□□□ 1.49
HLA-C-201ENST00000376228 WDR18Q9BV38 432 aa24.33■■□□□ 1.49
HLA-C-201ENST00000376228 PHF20Q9BVI0 1012 aa24.33■■□□□ 1.49
HLA-C-201ENST00000376228 SH3GLB2Q9NR46 395 aa24.33■■□□□ 1.49
HLA-C-201ENST00000376228 MPHOSPH10O00566 681 aaKnown RBP24.32■■□□□ 1.48
HLA-C-201ENST00000376228 SCG2P13521 617 aa24.32■■□□□ 1.48
HLA-C-201ENST00000376228 STAG2Q8N3U4 1231 aa24.32■■□□□ 1.48
HLA-C-201ENST00000376228 MKL1Q969V6 931 aa24.32■■□□□ 1.48
HLA-C-201ENST00000376228 ERO1AQ96HE7 468 aa24.32■■□□□ 1.48
HLA-C-201ENST00000376228 PARK7Q99497 189 aaKnown RBP24.32■■□□□ 1.48
HLA-C-201ENST00000376228 GINM1Q9NU53 330 aa24.32■■□□□ 1.48
HLA-C-201ENST00000376228 AGTPBP1Q9UPW5 1226 aa24.32■■□□□ 1.48
HLA-C-201ENST00000376228 TRIM17Q9Y577 477 aa24.32■■□□□ 1.48
HLA-C-201ENST00000376228 FSD2A1L4K1 749 aa24.31■■□□□ 1.48
HLA-C-201ENST00000376228 PARP1P09874 1014 aaKnown RBP24.31■■□□□ 1.48
HLA-C-201ENST00000376228 BACE1P56817 501 aa24.31■■□□□ 1.48
HLA-C-201ENST00000376228 ZSCAN23Q3MJ62 389 aa24.31■■□□□ 1.48
HLA-C-201ENST00000376228 NOSTRINQ8IVI9 506 aa24.31■■□□□ 1.48
HLA-C-201ENST00000376228 DIS3L2Q8IYB7 885 aaKnown RBP24.31■■□□□ 1.48
HLA-C-201ENST00000376228 PROCA1Q8NCQ7 364 aaPredicted RBP24.31■■□□□ 1.48
HLA-C-201ENST00000376228 NYAP2Q9P242 653 aa24.31■■□□□ 1.48
HLA-C-201ENST00000376228 ADGRA2Q96PE1 1338 aa24.31■■□□□ 1.48
HLA-C-201ENST00000376228 ZYXQ15942 572 aaKnown RBP24.3■■□□□ 1.48
HLA-C-201ENST00000376228 C17orf99Q6UX52 265 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 PGBD1Q96JS3 809 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 KANSL2Q9H9L4 492 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 CABP5Q9NP86 173 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 MGAMO43451 1857 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 USP17L10C9JJH3 530 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 KLRF2D3W0D1 207 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 GNL2Q13823 731 aaKnown RBP24.3■■□□□ 1.48
HLA-C-201ENST00000376228 SEPT2Q15019 361 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 ASPRV1Q53RT3 343 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 SH3D19Q5HYK7 790 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 TMEM179Q6ZVK1 233 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 OTOP1Q7RTM1 612 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 LINC00301Q8NCQ3 95 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 SHISA4Q96DD7 197 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 ARHGAP39Q9C0H5 1083 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 KCNJ14Q9UNX9 436 aa24.3■■□□□ 1.48
HLA-C-201ENST00000376228 GOLGA6L4A6NEF3 574 aa24.29■■□□□ 1.48
HLA-C-201ENST00000376228 BTBD18B2RXH4 712 aa24.29■■□□□ 1.48
HLA-C-201ENST00000376228 PDHBP11177 359 aa24.29■■□□□ 1.48
HLA-C-201ENST00000376228 DEKP35659 375 aaKnown RBP24.29■■□□□ 1.48
HLA-C-201ENST00000376228 ANO1Q5XXA6 986 aa24.29■■□□□ 1.48
HLA-C-201ENST00000376228 KCNG4Q8TDN1 519 aa24.29■■□□□ 1.48
HLA-C-201ENST00000376228 CLIP2Q9UDT6 1046 aa24.29■■□□□ 1.48
HLA-C-201ENST00000376228 SYNPO2Q9UMS6 1093 aa24.29■■□□□ 1.48
HLA-C-201ENST00000376228 SLC45A1Q9Y2W3 748 aa24.29■■□□□ 1.48
HLA-C-201ENST00000376228 CCDC85CA6NKD9 419 aa24.28■■□□□ 1.48
HLA-C-201ENST00000376228 CYTH3O43739 400 aa24.28■■□□□ 1.48
HLA-C-201ENST00000376228 SLC35G1Q2M3R5 365 aa24.28■■□□□ 1.48
HLA-C-201ENST00000376228 CCDC183Q5T5S1 534 aa24.28■■□□□ 1.48
HLA-C-201ENST00000376228 ACER1Q8TDN7 264 aa24.28■■□□□ 1.48
HLA-C-201ENST00000376228 FEZ1Q99689 392 aa24.28■■□□□ 1.48
HLA-C-201ENST00000376228 TMOD4Q9NZQ9 345 aa24.28■■□□□ 1.48
HLA-C-201ENST00000376228 VPS54Q9P1Q0 977 aa24.28■■□□□ 1.48
HLA-C-201ENST00000376228 LETM1O95202 739 aaPredicted RBP24.27■■□□□ 1.48
HLA-C-201ENST00000376228 LACTBP83111 547 aaPredicted RBP24.27■■□□□ 1.48
HLA-C-201ENST00000376228 CLEC10AQ8IUN9 316 aa24.27■■□□□ 1.48
HLA-C-201ENST00000376228 SMCR8Q8TEV9 937 aaPredicted RBP24.27■■□□□ 1.48
HLA-C-201ENST00000376228 RIOX1Q9H6W3 641 aa24.27■■□□□ 1.48
HLA-C-201ENST00000376228 EFCC1Q9HA90 598 aa24.27■■□□□ 1.48
HLA-C-201ENST00000376228 BRMS1Q9HCU9 246 aa24.27■■□□□ 1.48
HLA-C-201ENST00000376228 C19orf81C9J6K1 198 aa24.26■■□□□ 1.47
HLA-C-201ENST00000376228 KRT2P35908 639 aa24.26■■□□□ 1.47
HLA-C-201ENST00000376228 SLC39A14Q15043 492 aa24.26■■□□□ 1.47
HLA-C-201ENST00000376228 NPY5RQ15761 445 aa24.26■■□□□ 1.47
HLA-C-201ENST00000376228 RILPL1Q5EBL4 403 aa24.26■■□□□ 1.47
HLA-C-201ENST00000376228 FTOQ9C0B1 505 aaKnown RBP eCLIP24.26■■□□□ 1.47
HLA-C-201ENST00000376228 EMILIN3Q9NT22 766 aa24.26■■□□□ 1.47
HLA-C-201ENST00000376228 CLIC4Q9Y696 253 aa24.26■■□□□ 1.47
HLA-C-201ENST00000376228 MORC2Q9Y6X9 1032 aaPredicted RBP24.26■■□□□ 1.47
HLA-C-201ENST00000376228 CALML3P27482 149 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 PKN2Q16513 984 aaKnown RBP24.25■■□□□ 1.47
HLA-C-201ENST00000376228 ADALQ6DHV7 355 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 GALNT17Q6IS24 598 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 USP17L2Q6R6M4 530 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 A0A1W2PQ27 194 aa24.25■■□□□ 1.47
HLA-C-201ENST00000376228 A0A1W2PQ64 194 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms