RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TKFCQ3LXA3 575 aa27.56■■■□□ 2
C9orf47-202ENST00000375850 LENG1Q96BZ8 264 aaPredicted RBP27.56■■■□□ 2
C9orf47-202ENST00000375850 ACAD9Q9H845 621 aa27.56■■■□□ 2
C9orf47-202ENST00000375850 SMCHD1A6NHR9 2005 aa27.55■■■□□ 2
C9orf47-202ENST00000375850 KCNA10Q16322 511 aa27.55■■■□□ 2
C9orf47-202ENST00000375850 RNPC3Q96LT9 517 aaKnown RBP27.55■■■□□ 2
C9orf47-202ENST00000375850 UPF3AQ9H1J1 476 aaKnown RBP27.55■■■□□ 2
C9orf47-202ENST00000375850 SEMA6BQ9H3T3 888 aa27.55■■■□□ 2
C9orf47-202ENST00000375850 TMEM232C9JQI7 657 aa27.54■■■□□ 2
C9orf47-202ENST00000375850 MX1P20591 662 aa27.54■■■□□ 2
C9orf47-202ENST00000375850 SLC1A4P43007 532 aa27.54■■■□□ 2
C9orf47-202ENST00000375850 GJA9P57773 515 aa27.54■■■□□ 2
C9orf47-202ENST00000375850 FAAP100Q0VG06 881 aa27.54■■■□□ 2
C9orf47-202ENST00000375850 ARMCX2Q7L311 632 aa27.54■■■□□ 2
C9orf47-202ENST00000375850 STAG1Q8WVM7 1258 aa27.54■■■□□ 2
C9orf47-202ENST00000375850 FAM161BQ96MY7 647 aa27.54■■■□□ 2
C9orf47-202ENST00000375850 ZBTB47Q9UFB7 747 aaPredicted RBP27.54■■■□□ 2
C9orf47-202ENST00000375850 A0A0C4DFX4 3053 aa27.54■■■□□ 2
C9orf47-202ENST00000375850 C6orf222P0C671 652 aaPredicted RBP27.53■■■□□ 2
C9orf47-202ENST00000375850 ITGB8P26012 769 aa27.53■■■□□ 2
C9orf47-202ENST00000375850 CCDC144BQ3MJ40 725 aa27.53■■■□□ 2
C9orf47-202ENST00000375850 CCDC174Q6PII3 467 aa27.53■■■□□ 2
C9orf47-202ENST00000375850 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.53■■■□□ 2
C9orf47-202ENST00000375850 SEC62Q99442 399 aaKnown RBP27.53■■■□□ 2
C9orf47-202ENST00000375850 NKX3-2P78367 333 aa27.52■■■□□ 2
C9orf47-202ENST00000375850 IKQ13123 557 aaPredicted RBP27.52■■■□□ 2
C9orf47-202ENST00000375850 FGD4Q96M96 766 aa27.52■■■□□ 2
C9orf47-202ENST00000375850 CDX2Q99626 313 aaPredicted RBP27.52■■■□□ 2
C9orf47-202ENST00000375850 ISY1Q9ULR0 285 aaKnown RBP27.52■■■□□ 2
C9orf47-202ENST00000375850 PCDHB15Q9Y5E8 787 aa27.52■■■□□ 2
C9orf47-202ENST00000375850 ASB14A6NK59 587 aa27.51■■□□□ 1.99
C9orf47-202ENST00000375850 TSPY2A6NKD2 308 aa27.51■■□□□ 1.99
C9orf47-202ENST00000375850 TICAM2Q86XR7 235 aa27.51■■□□□ 1.99
C9orf47-202ENST00000375850 CCDC144CPQ8IYA2 1237 aa27.51■■□□□ 1.99
C9orf47-202ENST00000375850 FAM133AQ8N9E0 248 aa27.51■■□□□ 1.99
C9orf47-202ENST00000375850 MYH4Q9Y623 1939 aa27.51■■□□□ 1.99
C9orf47-202ENST00000375850 A0A0U1RQG5 324 aaPredicted RBP27.5■■□□□ 1.99
C9orf47-202ENST00000375850 TIMP1P01033 207 aa27.5■■□□□ 1.99
C9orf47-202ENST00000375850 ASGR1P07306 291 aa27.5■■□□□ 1.99
C9orf47-202ENST00000375850 CDK7P50613 346 aa27.5■■□□□ 1.99
C9orf47-202ENST00000375850 HOMER2Q9NSB8 354 aa27.5■■□□□ 1.99
C9orf47-202ENST00000375850 RNF146Q9NTX7 359 aa27.5■■□□□ 1.99
C9orf47-202ENST00000375850 TBX21Q9UL17 535 aa27.5■■□□□ 1.99
C9orf47-202ENST00000375850 STX8Q9UNK0 236 aa27.5■■□□□ 1.99
C9orf47-202ENST00000375850 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.5■■□□□ 1.99
C9orf47-202ENST00000375850 LAMA2P24043 3122 aaKnown RBP27.49■■□□□ 1.99
C9orf47-202ENST00000375850 GNASQ5JWF2 1037 aa27.49■■□□□ 1.99
C9orf47-202ENST00000375850 RCSD1Q6JBY9 416 aa27.49■■□□□ 1.99
C9orf47-202ENST00000375850 SEZ6LQ9BYH1 1024 aa27.49■■□□□ 1.99
C9orf47-202ENST00000375850 A1CFQ9NQ94 594 aaKnown RBP27.49■■□□□ 1.99
C9orf47-202ENST00000375850 ANAPC4Q9UJX5 808 aa27.49■■□□□ 1.99
C9orf47-202ENST00000375850 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.48■■□□□ 1.99
C9orf47-202ENST00000375850 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.48■■□□□ 1.99
C9orf47-202ENST00000375850 MYADML2A6NDP7 307 aa27.48■■□□□ 1.99
C9orf47-202ENST00000375850 ARVCFO00192 962 aa27.48■■□□□ 1.99
C9orf47-202ENST00000375850 MCCP23508 829 aa27.48■■□□□ 1.99
C9orf47-202ENST00000375850 MFSD5Q6N075 450 aa27.48■■□□□ 1.99
C9orf47-202ENST00000375850 VTI1AQ96AJ9 217 aa27.48■■□□□ 1.99
C9orf47-202ENST00000375850 EVI5LQ96CN4 794 aa27.48■■□□□ 1.99
C9orf47-202ENST00000375850 KATNBL1Q9H079 304 aa27.48■■□□□ 1.99
C9orf47-202ENST00000375850 ZNF536O15090 1300 aa27.47■■□□□ 1.99
C9orf47-202ENST00000375850 TLR3O15455 904 aaKnown RBP27.47■■□□□ 1.99
C9orf47-202ENST00000375850 CABYRO75952 493 aa27.47■■□□□ 1.99
C9orf47-202ENST00000375850 EPHB4P54760 987 aa27.47■■□□□ 1.99
C9orf47-202ENST00000375850 PPIGQ13427 754 aaKnown RBP eCLIP27.47■■□□□ 1.99
C9orf47-202ENST00000375850 CCDC129Q6ZRS4 1044 aa27.47■■□□□ 1.99
C9orf47-202ENST00000375850 OTUD7AQ8TE49 926 aaPredicted RBP27.47■■□□□ 1.99
C9orf47-202ENST00000375850 TRERF1Q96PN7 1200 aa27.47■■□□□ 1.99
C9orf47-202ENST00000375850 TNFAIP2Q03169 654 aa27.46■■□□□ 1.99
C9orf47-202ENST00000375850 MAFAQ8NHW3 353 aaPredicted RBP27.46■■□□□ 1.99
C9orf47-202ENST00000375850 AGBL1Q96MI9 1066 aa27.46■■□□□ 1.99
C9orf47-202ENST00000375850 TTYH1Q9H313 450 aaPredicted RBP27.46■■□□□ 1.99
C9orf47-202ENST00000375850 CUL9Q8IWT3 2517 aa27.45■■□□□ 1.99
C9orf47-202ENST00000375850 SALL3Q9BXA9 1300 aa27.45■■□□□ 1.99
C9orf47-202ENST00000375850 ADCY6O43306 1168 aa27.45■■□□□ 1.98
C9orf47-202ENST00000375850 ORC4O43929 436 aa27.45■■□□□ 1.98
C9orf47-202ENST00000375850 NOVP48745 357 aa27.45■■□□□ 1.98
C9orf47-202ENST00000375850 CNTN2Q02246 1040 aa27.45■■□□□ 1.98
C9orf47-202ENST00000375850 ALX1Q15699 326 aa27.45■■□□□ 1.98
C9orf47-202ENST00000375850 TMEM199Q8N511 208 aa27.45■■□□□ 1.98
C9orf47-202ENST00000375850 HELLSQ9NRZ9 838 aa27.45■■□□□ 1.98
C9orf47-202ENST00000375850 FOXP2O15409 715 aa27.44■■□□□ 1.98
C9orf47-202ENST00000375850 ZEB2O60315 1214 aa27.44■■□□□ 1.98
C9orf47-202ENST00000375850 ALAS1P13196 640 aa27.44■■□□□ 1.98
C9orf47-202ENST00000375850 DCAF4Q8WV16 495 aa27.44■■□□□ 1.98
C9orf47-202ENST00000375850 IL17RBQ9NRM6 502 aa27.44■■□□□ 1.98
C9orf47-202ENST00000375850 PNMA2Q9UL42 364 aa27.44■■□□□ 1.98
C9orf47-202ENST00000375850 PRR12Q9ULL5 1215 aa27.44■■□□□ 1.98
C9orf47-202ENST00000375850 Q9Y3F1 56 aa27.44■■□□□ 1.98
C9orf47-202ENST00000375850 SOWAHBA6NEL2 793 aa27.43■■□□□ 1.98
C9orf47-202ENST00000375850 RANBP6O60518 1105 aaKnown RBP27.43■■□□□ 1.98
C9orf47-202ENST00000375850 FGRP09769 529 aa27.43■■□□□ 1.98
C9orf47-202ENST00000375850 CTDSPL2Q05D32 466 aa27.43■■□□□ 1.98
C9orf47-202ENST00000375850 KCTD1Q719H9 257 aa27.43■■□□□ 1.98
C9orf47-202ENST00000375850 NOL8Q76FK4 1167 aaKnown RBP27.43■■□□□ 1.98
C9orf47-202ENST00000375850 FAM126BQ8IXS8 530 aa27.43■■□□□ 1.98
C9orf47-202ENST00000375850 LOC102724159A0A0B4J2E5 919 aa27.42■■□□□ 1.98
C9orf47-202ENST00000375850 CTAGE5O15320 804 aa27.42■■□□□ 1.98
C9orf47-202ENST00000375850 FOSL2P15408 326 aa27.42■■□□□ 1.98
C9orf47-202ENST00000375850 PWP2Q15269 919 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms