RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SNRNP27Q8WVK2 155 aaKnown RBP11.25□□□□□ -0.61
CD28-202ENST00000374481 MAIP1Q8WWC4 291 aa11.25□□□□□ -0.61
CD28-202ENST00000374481 KAT2BQ92831 832 aa11.25□□□□□ -0.61
CD28-202ENST00000374481 OLFM3Q96PB7 478 aa11.25□□□□□ -0.61
CD28-202ENST00000374481 ABHD10Q9NUJ1 306 aa11.25□□□□□ -0.61
CD28-202ENST00000374481 PAG1Q9NWQ8 432 aa11.25□□□□□ -0.61
CD28-202ENST00000374481 WDR7Q9Y4E6 1490 aa11.25□□□□□ -0.61
CD28-202ENST00000374481 A0A087WZG4 1122 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 H7C1D1 291 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 RAD21O60216 631 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 PPP6R2O75170 966 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 ATP6V1G2O95670 118 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 ATP5JP18859 108 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 ROR2Q01974 943 aaKnown RBP11.24□□□□□ -0.61
CD28-202ENST00000374481 ZNF174Q15697 407 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 ZIM3Q96PE6 472 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 MYD88Q99836 296 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 UBA5Q9GZZ9 404 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 C21orf2O43822 256 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 COBLO75128 1261 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 IRX4P78413 519 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 CATIPQ7Z7H3 387 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 FAM81AQ8TBF8 368 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 ARL8AQ96BM9 186 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 SYCP2Q9BX26 1530 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.24□□□□□ -0.61
CD28-202ENST00000374481 ATP2A1O14983 1001 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 TEX33O43247 280 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 RPS6KA3P51812 740 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 RBM5P52756 815 aaKnown RBP eCLIP11.24□□□□□ -0.61
CD28-202ENST00000374481 ARMC3Q5W041 872 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 RAD9BQ6WBX8 426 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 SPATA4Q8NEY3 305 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 NAF1Q96HR8 494 aaKnown RBP11.24□□□□□ -0.61
CD28-202ENST00000374481 PLIN2Q99541 437 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 Q9H521 79 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
CD28-202ENST00000374481 SYNCQ9H7C4 482 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 C14orf93Q9H972 538 aaKnown RBP11.24□□□□□ -0.61
CD28-202ENST00000374481 KCND1Q9NSA2 647 aa11.24□□□□□ -0.61
CD28-202ENST00000374481 KRT15P19012 456 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 KCNA3P22001 575 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 PDIA3P30101 505 aaKnown RBP11.23□□□□□ -0.61
CD28-202ENST00000374481 CDC25CP30307 473 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 CA8P35219 290 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 RASSF7Q02833 373 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 SNX1Q13596 522 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 MFSD6Q6ZSS7 791 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 C3orf20Q8ND61 904 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 DNAJC9Q8WXX5 260 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 CFAP57Q96MR6 1250 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 TMEM165Q9HC07 324 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 NLRC4Q9NPP4 1024 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 PARP2Q9UGN5 583 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
CD28-202ENST00000374481 L3MBTL1Q9Y468 752 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 CEP170Q5SW79 1584 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 CARMIL3Q8ND23 1372 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 GRM8O00222 908 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 PTPROQ16827 1216 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 OLFML2BQ68BL8 750 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 KDM7AQ6ZMT4 941 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 RASGRP2Q7LDG7 609 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 SMYD4Q8IYR2 804 aaPredicted RBP11.23□□□□□ -0.61
CD28-202ENST00000374481 RNF41Q9H4P4 317 aaPredicted RBP11.23□□□□□ -0.61
CD28-202ENST00000374481 CHPF2Q9P2E5 772 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 TMEM110-MUSTN1A8MSY1 372 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 E7EWF7 191 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 SLCO1A2P46721 670 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 MRPL12P52815 198 aaKnown RBP11.23□□□□□ -0.61
CD28-202ENST00000374481 KLHL30Q0D2K2 578 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
CD28-202ENST00000374481 DAAM1Q9Y4D1 1078 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 NOS1P29475 1434 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 KLHL33A6NCF5 533 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 MCM7P33993 719 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 KRT2P35908 639 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 CUL1Q13616 776 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 GRAMD1CQ8IYS0 662 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 GGT7Q9UJ14 662 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 CLASP1Q7Z460 1538 aa11.23□□□□□ -0.61
CD28-202ENST00000374481 ARHGAP42A6NI28 874 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 TMOD1P28289 359 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 AARSP49588 968 aaKnown RBP eCLIP11.22□□□□□ -0.61
CD28-202ENST00000374481 PDE4DQ08499 809 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 SEL1L2Q5TEA6 688 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 OPTNQ96CV9 577 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 MRRFQ96E11 262 aaKnown RBP11.22□□□□□ -0.61
CD28-202ENST00000374481 NHEJ1Q9H9Q4 299 aaPredicted RBP11.22□□□□□ -0.61
CD28-202ENST00000374481 ANGPTL2Q9UKU9 493 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 ANGEL1Q9UNK9 670 aaKnown RBP11.22□□□□□ -0.61
CD28-202ENST00000374481 ABCC10Q5T3U5 1492 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 RNF113AO15541 343 aaKnown RBP11.22□□□□□ -0.61
CD28-202ENST00000374481 ZNF189O75820 626 aaPredicted RBP11.22□□□□□ -0.61
CD28-202ENST00000374481 ATP5HO75947 161 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 EEF2P13639 858 aaKnown RBP11.22□□□□□ -0.61
CD28-202ENST00000374481 PPP1R2P41236 205 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms