RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 CDK11BP21127 795 aaKnown RBP15.17■□□□□ 0.02
CSTF2-201ENST00000372972 CASP1P29466 404 aa15.17■□□□□ 0.02
CSTF2-201ENST00000372972 TMEM60Q9H2L4 133 aa15.17■□□□□ 0.02
CSTF2-201ENST00000372972 DHX36Q9H2U1 1008 aaKnown RBP15.17■□□□□ 0.02
CSTF2-201ENST00000372972 PPP1R1BQ9UD71 204 aaPredicted RBP15.17■□□□□ 0.02
CSTF2-201ENST00000372972 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
CSTF2-201ENST00000372972 COL4A5P29400 1685 aa15.17■□□□□ 0.02
CSTF2-201ENST00000372972 GTPBP6O43824 516 aaPredicted RBP15.16■□□□□ 0.02
CSTF2-201ENST00000372972 SFPQP23246 707 aaKnown RBP eCLIP15.16■□□□□ 0.02
CSTF2-201ENST00000372972 TPD52L1Q16890 204 aaPredicted RBP15.16■□□□□ 0.02
CSTF2-201ENST00000372972 ARMCX5Q6P1M9 558 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 ZFPM1Q8IX07 1006 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 MYRIPQ8NFW9 859 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 STAMQ92783 540 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 UPF1Q92900 1129 aaKnown RBP eCLIP15.16■□□□□ 0.02
CSTF2-201ENST00000372972 MED15Q96RN5 788 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 IDI2Q9BXS1 227 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 GPCPD1Q9NPB8 672 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 PSME4Q14997 1843 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 MPHOSPH10O00566 681 aaKnown RBP15.16■□□□□ 0.02
CSTF2-201ENST00000372972 NRDCO43847 1150 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 RAD17O75943 681 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 CACNB3P54284 484 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 ZNF543Q08ER8 600 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 DALRD3Q5D0E6 543 aaKnown RBP15.16■□□□□ 0.02
CSTF2-201ENST00000372972 NEK8Q86SG6 692 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 CLEC10AQ8IUN9 316 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 VSTM4Q8IW00 320 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 TRMT44Q8IYL2 757 aaKnown RBP15.16■□□□□ 0.02
CSTF2-201ENST00000372972 REXO1Q8N1G1 1221 aaKnown RBP15.16■□□□□ 0.02
CSTF2-201ENST00000372972 DISC1Q9NRI5 854 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 KCND1Q9NSA2 647 aa15.16■□□□□ 0.02
CSTF2-201ENST00000372972 CCNT1O60563 726 aaKnown RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 CDC25AP30304 524 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 UBA7P41226 1012 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 STAT6P42226 847 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 ORC2Q13416 577 aaPredicted RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 CUL4BQ13620 913 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 LETM2Q2VYF4 491 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 GPATCH4Q5T3I0 446 aaKnown RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 SPATA1Q5VX52 437 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 MTRQ99707 1265 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 SGIP1Q9BQI5 828 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 CCSER1Q9C0I3 900 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 VPS33BQ9H267 617 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 PNMA6FA0A0J9YX94 578 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 PSDA5PKW4 1024 aaPredicted RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 PPP1R3GB7ZBB8 358 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 PSMD14O00487 310 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 KARSQ15046 597 aaKnown RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 HSP90AA4PQ58FG1 418 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 RRAGBQ5VZM2 374 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 RSBN1LQ6PCB5 846 aaPredicted RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 AK8Q96MA6 479 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 BLZF1Q9H2G9 400 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 JMJD4Q9H9V9 463 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 SAMSN1Q9NSI8 373 aaKnown RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 PI4KBQ9UBF8 816 aa15.15■□□□□ 0.02
CSTF2-201ENST00000372972 BIN2Q9UBW5 565 aaPredicted RBP15.15■□□□□ 0.02
CSTF2-201ENST00000372972 DYNC1I1O14576 645 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 VIL1P09327 827 aaKnown RBP15.14■□□□□ 0.01
CSTF2-201ENST00000372972 OR52Z1P0C646 297 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 ATP2B2Q01814 1243 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 TCP10Q12799 353 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 KLHL10Q6JEL2 608 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 ADGRF4Q8IZF3 695 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 TBCKQ8TEA7 893 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 COA7Q96BR5 231 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 C16orf45Q96MC5 204 aaPredicted RBP15.14■□□□□ 0.01
CSTF2-201ENST00000372972 RMND1Q9NWS8 449 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 FAM198AQ9UFP1 575 aa15.14■□□□□ 0.01
CSTF2-201ENST00000372972 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
CSTF2-201ENST00000372972 DDTLA6NHG4 134 aaPredicted RBP15.13■□□□□ 0.01
CSTF2-201ENST00000372972 TMEM232C9JQI7 657 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 TNNT1P13805 278 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 KCNJ6P48051 423 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 ADCY7P51828 1080 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 JAKMIP3Q5VZ66 844 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 NIM1KQ8IY84 436 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 RASSF8Q8NHQ8 419 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 TDRD3Q9H7E2 651 aaKnown RBP15.13■□□□□ 0.01
CSTF2-201ENST00000372972 DNAJC18Q9H819 358 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 INTS13Q9NVM9 706 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 SYNRGQ9UMZ2 1314 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 PP2D1A8MPX8 630 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 RPN1P04843 607 aaKnown RBP15.13■□□□□ 0.01
CSTF2-201ENST00000372972 CERKLQ49MI3 558 aaPredicted RBP15.13■□□□□ 0.01
CSTF2-201ENST00000372972 PPP1R18Q6NYC8 613 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 ZSCAN29Q8IWY8 852 aaPredicted RBP15.13■□□□□ 0.01
CSTF2-201ENST00000372972 SMYD4Q8IYR2 804 aaPredicted RBP15.13■□□□□ 0.01
CSTF2-201ENST00000372972 CCAR2Q8N163 923 aaKnown RBP15.13■□□□□ 0.01
CSTF2-201ENST00000372972 MKL1Q969V6 931 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 PRMT6Q96LA8 375 aaPredicted RBP15.13■□□□□ 0.01
CSTF2-201ENST00000372972 GMLQ99445 158 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 ZNRF3Q9ULT6 936 aa15.13■□□□□ 0.01
CSTF2-201ENST00000372972 MYL1P05976 194 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 STX17P56962 302 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 CCDC96Q2M329 555 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms