RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 ADORA2AP29274 412 aa17.51■□□□□ 0.39
SNX21-203ENST00000372541 UBXN2AP68543 259 aa17.51■□□□□ 0.39
SNX21-203ENST00000372541 KCTD2Q14681 263 aa17.51■□□□□ 0.39
SNX21-203ENST00000372541 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
SNX21-203ENST00000372541 CATIPQ7Z7H3 387 aa17.51■□□□□ 0.39
SNX21-203ENST00000372541 ABRAQ8N0Z2 381 aa17.51■□□□□ 0.39
SNX21-203ENST00000372541 IGDCC4Q8TDY8 1250 aa17.51■□□□□ 0.39
SNX21-203ENST00000372541 RANBP17Q9H2T7 1088 aaKnown RBP17.51■□□□□ 0.39
SNX21-203ENST00000372541 LY9Q9HBG7 655 aa17.51■□□□□ 0.39
SNX21-203ENST00000372541 ZNF536O15090 1300 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 PLXNB2O15031 1838 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 SH2B2O14492 632 aaPredicted RBP17.5■□□□□ 0.39
SNX21-203ENST00000372541 HMGCRP04035 888 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 HMGB1P09429 215 aaKnown RBP17.5■□□□□ 0.39
SNX21-203ENST00000372541 CCL5P13501 91 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 SNAP25P60880 206 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 ADCK5Q3MIX3 580 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 NFXL1Q6ZNB6 911 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 TRMT44Q8IYL2 757 aaKnown RBP17.5■□□□□ 0.39
SNX21-203ENST00000372541 KCNB2Q92953 911 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 MMP19Q99542 508 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 HTATIP2Q9BUP3 242 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 SENP2Q9HC62 589 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 HOMER2Q9NSB8 354 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 FBXO40Q9UH90 709 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 SNX14Q9Y5W7 946 aa17.5■□□□□ 0.39
SNX21-203ENST00000372541 WDR19Q8NEZ3 1342 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 CCDC69A6NI79 296 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 EIF5BO60841 1220 aaKnown RBP17.49■□□□□ 0.39
SNX21-203ENST00000372541 INHAP05111 366 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 ICAM1P05362 532 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 HOXC6P09630 235 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 COL9A3Q14050 684 aaPredicted RBP17.49■□□□□ 0.39
SNX21-203ENST00000372541 DPP9Q86TI2 863 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 TMTC2Q8N394 836 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 CHST13Q8NET6 341 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 TRIB2Q92519 343 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 AGBL1Q96MI9 1066 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 CCPG1Q9ULG6 757 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 RIPK3Q9Y572 518 aa17.49■□□□□ 0.39
SNX21-203ENST00000372541 DHX16O60231 1041 aaKnown RBP17.48■□□□□ 0.39
SNX21-203ENST00000372541 DDAH1O94760 285 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 LIFRP42702 1097 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 TROAPQ12815 778 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 TKFCQ3LXA3 575 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
SNX21-203ENST00000372541 ZNF654Q8IZM8 581 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
SNX21-203ENST00000372541 USP26Q9BXU7 913 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 UBA5Q9GZZ9 404 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 RNF208Q9H0X6 261 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 ACAD9Q9H845 621 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 GPHNQ9NQX3 736 aaPredicted RBP17.48■□□□□ 0.39
SNX21-203ENST00000372541 MAD2L2Q9UI95 211 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 PNMA2Q9UL42 364 aa17.48■□□□□ 0.39
SNX21-203ENST00000372541 ALAS1P13196 640 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 PSMA5P28066 241 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 GRM4Q14833 912 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 CCL14Q16627 93 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 ANKRD35Q8N283 1001 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 NUP133Q8WUM0 1156 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 CPVLQ9H3G5 476 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 RNF146Q9NTX7 359 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 NR2E3Q9Y5X4 410 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 COL6A3P12111 3177 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 LAMA3Q16787 3333 aa17.47■□□□□ 0.39
SNX21-203ENST00000372541 A0A0C4DFX4 3053 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 PALM3A6NDB9 673 aaPredicted RBP17.46■□□□□ 0.39
SNX21-203ENST00000372541 KLRF2D3W0D1 207 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 PGK2P07205 417 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 FGD1P98174 961 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 EXOSC10Q01780 885 aaKnown RBP17.46■□□□□ 0.39
SNX21-203ENST00000372541 CDC37Q16543 378 aaPredicted RBP17.46■□□□□ 0.39
SNX21-203ENST00000372541 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNX21-203ENST00000372541 STAG2Q8N3U4 1231 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 CTCFLQ8NI51 663 aaPredicted RBP17.46■□□□□ 0.39
SNX21-203ENST00000372541 NPLOC4Q8TAT6 608 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 U2AF1L4Q8WU68 220 aaKnown RBP17.46■□□□□ 0.39
SNX21-203ENST00000372541 DDX11Q96FC9 970 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 TCEANC2Q96MN5 208 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 TRERF1Q96PN7 1200 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 MAP3K14Q99558 947 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 MYL10Q9BUA6 226 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 SLC12A7Q9Y666 1083 aa17.46■□□□□ 0.39
SNX21-203ENST00000372541 DOCK3Q8IZD9 2030 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 A0A1W2PPC1 479 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 COBLO75128 1261 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 SGPL1O95470 568 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 CALM1P0DP23 149 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 CALM2P0DP24 149 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 CALM3P0DP25 149 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 KIF5BP33176 963 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 MFSD14CQ5VZR4 134 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 SGMS1Q86VZ5 419 aa17.45■□□□□ 0.38
SNX21-203ENST00000372541 DLL1O00548 723 aa17.44■□□□□ 0.38
SNX21-203ENST00000372541 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms