RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 KDM3AQ9Y4C1 1321 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 HPDP32754 393 aaPredicted RBP14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 KCTD2Q14681 263 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 PRR16Q569H4 304 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 TMTC1Q8IUR5 882 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 CPSF1Q10570 1443 aaKnown RBP14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 SYNRGQ9UMZ2 1314 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 SPOUT1Q5T280 376 aaKnown RBP14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 DYMQ7RTS9 669 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 NUP58Q9BVL2 599 aa14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 MRPL44Q9H9J2 332 aaKnown RBP14.69□□□□□ -0.06
RAPGEF1-201ENST00000372189 TLR7Q9NYK1 1049 aaKnown RBP14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 ANAPC4Q9UJX5 808 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 JAK2O60674 1132 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 GCNT3O95395 438 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 DYNLL1P63167 89 aaKnown RBP14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 METTL13Q8N6R0 699 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 DHX36Q9H2U1 1008 aaKnown RBP14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 CDC42BPBQ9Y5S2 1711 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 TBC1D8BQ0IIM8 1120 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 HLFQ16534 295 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 SLFN12Q8IYM2 578 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 STMN2Q93045 179 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 TRIM4Q9C037 500 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 GOLGA6BA6NDN3 693 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 ZBTB7AO95365 584 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 IREB2P48200 963 aaKnown RBP14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 TBC1D10BQ4KMP7 808 aaPredicted RBP14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 GALNT17Q6IS24 598 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 DPP9Q86TI2 863 aa14.68□□□□□ -0.06
RAPGEF1-201ENST00000372189 TTLL1O95922 423 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 SKOR1P84550 965 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 ZMYM1Q5SVZ6 1142 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 VPS16Q9H269 839 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 CARMIL3Q8ND23 1372 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 GSPT1P15170 499 aaKnown RBP14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 PLCB3Q01970 1234 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 GJC2Q5T442 439 aaPredicted RBP14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 RAB3IL1Q8TBN0 382 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 SECISBP2LQ93073 1101 aaKnown RBP14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 CIB2O75838 187 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 HSPA1LP34931 641 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 FLOT2Q14254 428 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 CROCCP2Q86T23 111 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 TBC1D7Q9P0N9 293 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 SORBS3O60504 671 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 HIP1RO75146 1068 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 SCG2P13521 617 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 DEPTORQ8TB45 409 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 ABT1Q9ULW3 272 aaKnown RBP14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 PSMD6Q15008 389 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 RUFY4Q6ZNE9 571 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 CSGALNACT2Q8N6G5 542 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 KIAA1524Q8TCG1 905 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 TMEM63CQ9P1W3 806 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 ADCY9O60503 1353 aa14.67□□□□□ -0.06
RAPGEF1-201ENST00000372189 GPR161Q8N6U8 529 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 CROCC2H7BZ55 1655 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 C1orf167Q5SNV9 1468 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 M0R2C6 588 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 ACTN4O43707 911 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 GBP1P32455 592 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 ADD2P35612 726 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 SNX16P57768 344 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 RAD51AP2Q09MP3 1159 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 NOX5Q96PH1 765 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 PALD1Q9ULE6 856 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 UTP11Q9Y3A2 253 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 PPFIA2O75334 1257 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 GDF11O95390 407 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 BRD1O95696 1058 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 EN1Q05925 392 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 PAK1Q13153 545 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 ASPRV1Q53RT3 343 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 FAM102BQ5T8I3 360 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 SPICE1Q8N0Z3 855 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 ZNF513Q8N8E2 541 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 TTLL11Q8NHH1 800 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 TEKT3Q9BXF9 490 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 MAPK8IP1Q9UQF2 711 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 BUB1BO60566 1050 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 PPFIA1Q13136 1202 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 GPATCH4Q5T3I0 446 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 KRT26Q7Z3Y9 468 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 ZNF202O95125 648 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 MRPS9P82933 396 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 TXNRD1Q16881 649 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 TMCO4Q5TGY1 634 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 CACNA2D3Q8IZS8 1091 aa14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 ARHGEF1Q92888 912 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 MAK16Q9BXY0 300 aaKnown RBP14.66□□□□□ -0.06
RAPGEF1-201ENST00000372189 EXOC3O60645 756 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 VPS72Q15906 364 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 ME3Q16798 604 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 UTP14CQ5TAP6 766 aaKnown RBP14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 CDC37L1Q7L3B6 337 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 GPKOWQ92917 476 aaPredicted RBP eCLIP14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 RNF34Q969K3 372 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms