RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 ACTR5Q9H9F9 607 aaPredicted RBP10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 NHEJ1Q9H9Q4 299 aaPredicted RBP10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 LIMA1Q9UHB6 759 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 GDAQ9Y2T3 454 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 FLT4P35916 1363 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 FMN2Q9NZ56 1722 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 MYO5AQ9Y4I1 1855 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 F8W031 263 aaPredicted RBP10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 SLC8A1P32418 973 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 TUBP50607 506 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 RWDD2BP57060 319 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 NTRK3Q16288 839 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 WASHC4Q2M389 1173 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 GNPTABQ3T906 1256 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 EARS2Q5JPH6 523 aaKnown RBP10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 MSL1Q68DK7 614 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 EMBQ6PCB8 327 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 NOSTRINQ8IVI9 506 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 ACSBG1Q96GR2 724 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 RPGRIP1Q96KN7 1286 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 CTAGE1Q96RT6 745 aa10.48□□□□□ -0.73
HMGCLL1-204ENST00000370852 PPIP5K2O43314 1243 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 TRAPPC3O43617 180 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 FKBP4Q02790 459 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 FAM133BQ5BKY9 247 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 C8orf74Q6P047 294 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 TMC4Q7Z404 712 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 DIS3L2Q8IYB7 885 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 TRIML1Q8N9V2 468 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 EHBP1Q8NDI1 1231 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 KCNV2Q8TDN2 545 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 MTFR1LQ9H019 292 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 PUS7LQ9H0K6 701 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 AGAP1Q9UPQ3 857 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 LUC7L2Q9Y383 392 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 RNF113AO15541 343 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 KRT86O43790 486 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 HEXIM1O94992 359 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 KCNJ2P63252 427 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 ICA1Q05084 483 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 CCDC96Q2M329 555 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 PI16Q6UXB8 463 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 RIC3Q7Z5B4 369 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 DDX42Q86XP3 938 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 TBC1D10CQ8IV04 446 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 SYMPKQ92797 1274 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 HOOK2Q96ED9 719 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 DNAJC7Q99615 494 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 MTRQ99707 1265 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 CABP5Q9NP86 173 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 PICK1Q9NRD5 415 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 SLC12A6Q9UHW9 1150 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 USP31Q70CQ4 1352 aa10.47□□□□□ -0.73
HMGCLL1-204ENST00000370852 NEURL1BA8MQ27 555 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 ATP5J2-PTCD1G3V325 749 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 PTCD1O75127 700 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 IARSP41252 1262 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 DRP2Q13474 957 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 CCDC70Q6NSX1 233 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 CCDC50Q8IVM0 306 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 MB21D1Q8N884 522 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 NELFBQ8WX92 580 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 CNKSR2Q8WXI2 1034 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 SHISA4Q96DD7 197 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 L3MBTL3Q96JM7 780 aaPredicted RBP10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 PURBQ96QR8 312 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 TMBIM4Q9HC24 238 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 PCDHGC5Q9Y5F6 944 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 UTYO14607 1347 aa10.46□□□□□ -0.73
HMGCLL1-204ENST00000370852 hCG_1642624A0A1W2PR95 340 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 LRRC10BA6NIK2 292 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 SPDYE5A6NIY4 337 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 B4DLN1 442 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 B4E1Z4 1266 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 BUB1O43683 1085 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 MRC1P22897 1456 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 HOXC9P31274 260 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 FLT3P36888 993 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 MAP3K12Q12852 859 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 GCKRQ14397 625 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 UAP1Q16222 522 aaPredicted RBP10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 LACTB2Q53H82 288 aaPredicted RBP10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 APOA5Q6Q788 366 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 ERICH1Q86X53 443 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 CACNA2D3Q8IZS8 1091 aa10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZNF594Q96JF6 807 aaPredicted RBP10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 PACSIN2Q9UNF0 486 aaPredicted RBP10.46□□□□□ -0.74
HMGCLL1-204ENST00000370852 NWD1Q149M9 1564 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 MLH3Q9UHC1 1453 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 XDHP47989 1333 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 H7C1W4 665 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 PARP1P09874 1014 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 PDIA6Q15084 440 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 RBBP5Q15291 538 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 CDC37Q16543 378 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 IMMTQ16891 758 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 EMC10Q5UCC4 262 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 PPP4R3AQ6IN85 833 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 SH3RF1Q7Z6J0 888 aa10.45□□□□□ -0.74
HMGCLL1-204ENST00000370852 RALYLQ86SE5 291 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms