RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 PPP6R2O75170 966 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 LONRF2Q1L5Z9 754 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 SPATA24Q86W54 205 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 PTPN12Q05209 780 aaKnown RBP21.66■■□□□ 1.06
LMO4-202ENST00000370544 GPATCH4Q5T3I0 446 aaKnown RBP21.66■■□□□ 1.06
LMO4-202ENST00000370544 MAGEF1Q9HAY2 307 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 H0YCG3 227 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 LAD1O00515 517 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 SLC39A14Q15043 492 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 ANKRD35Q8N283 1001 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 DESI2Q9BSY9 194 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 AMNQ9BXJ7 453 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.66■■□□□ 1.06
LMO4-202ENST00000370544 FAM26FQ5R3K3 315 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 LCORLQ8N3X6 602 aa21.66■■□□□ 1.06
LMO4-202ENST00000370544 PPANQ9NQ55 473 aaKnown RBP21.66■■□□□ 1.06
LMO4-202ENST00000370544 ABCB4P21439 1286 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 TRAPPC10P48553 1259 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 TTLL1O95922 423 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 HACE1Q8IYU2 909 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 GPATCH11Q8N954 259 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 FAM170AA1A519 330 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 IGSF3O75054 1194 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 IRX5P78411 483 aaPredicted RBP21.65■■□□□ 1.06
LMO4-202ENST00000370544 MTMR3Q13615 1198 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 TAOK1Q7L7X3 1001 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 MRFAP1L1Q96HT8 127 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 TRIM37O94972 964 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 ADAM9Q13443 819 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 PI16Q6UXB8 463 aa21.65■■□□□ 1.06
LMO4-202ENST00000370544 PUS7LQ9H0K6 701 aaKnown RBP21.65■■□□□ 1.06
LMO4-202ENST00000370544 RPGRIP1Q96KN7 1286 aa21.64■■□□□ 1.06
LMO4-202ENST00000370544 PRKAB2O43741 272 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 BBOX1O75936 387 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 SND1Q7KZF4 910 aaKnown RBP eCLIP21.64■■□□□ 1.05
LMO4-202ENST00000370544 CSRNP1Q96S65 589 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 PABPC4Q13310 644 aaKnown RBP eCLIP21.64■■□□□ 1.058e-11■■■■■ 28.8
LMO4-202ENST00000370544 WHAMMP3Q1A5X7 153 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 CEP57Q86XR8 500 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 SMC1BQ8NDV3 1235 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 METTL14Q9HCE5 456 aaKnown RBP21.64■■□□□ 1.05
LMO4-202ENST00000370544 LARSQ9P2J5 1176 aaKnown RBP21.64■■□□□ 1.05
LMO4-202ENST00000370544 PPP2R2CQ9Y2T4 447 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 CCDC125Q86Z20 511 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 GABPB2Q8TAK5 448 aaPredicted RBP21.64■■□□□ 1.05
LMO4-202ENST00000370544 CHAMP1Q96JM3 812 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.64■■□□□ 1.05
LMO4-202ENST00000370544 ABCC3O15438 1527 aa21.64■■□□□ 1.05
LMO4-202ENST00000370544 TSPOAP1O95153 1857 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 DMP1Q13316 513 aaPredicted RBP21.63■■□□□ 1.05
LMO4-202ENST00000370544 GEN1Q17RS7 908 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 B4GALNT4Q76KP1 1039 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 NCAPG2Q86XI2 1143 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 DCPSQ96C86 337 aaKnown RBP21.63■■□□□ 1.05
LMO4-202ENST00000370544 C1orf112Q9NSG2 853 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 RABGAP1Q9Y3P9 1069 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 NDUFAB1O14561 156 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 CRCPO75575 148 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 POLR2FP61218 127 aaKnown RBP21.63■■□□□ 1.05
LMO4-202ENST00000370544 CCDC89Q8N998 374 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 PIGBQ92521 554 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 POLR3EQ9NVU0 708 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 STIM2Q9P246 746 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 CLRN2A0PK11 232 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 CYP4A11Q02928 519 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 NACA2Q9H009 215 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 RAB17Q9H0T7 212 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 YARSP54577 528 aaKnown RBP21.63■■□□□ 1.05
LMO4-202ENST00000370544 DPY19L2Q6NUT2 758 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 ARHGAP27Q6ZUM4 889 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 OSBP2Q969R2 916 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 TET3O43151 1660 aa21.63■■□□□ 1.05
LMO4-202ENST00000370544 CCT6BQ92526 530 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 KIAA1024Q9UPX6 916 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 TNNC2P02585 160 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 ARMCX5Q6P1M9 558 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 CUEDC2Q9H467 287 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 A6NNZ2 444 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 SH2B2O14492 632 aaPredicted RBP21.62■■□□□ 1.05
LMO4-202ENST00000370544 TUBB8Q3ZCM7 444 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 SPICE1Q8N0Z3 855 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 ST7Q9NRC1 585 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 KCNQ4P56696 695 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.62■■□□□ 1.05
LMO4-202ENST00000370544 HYOU1Q9Y4L1 999 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 ADCY10Q96PN6 1610 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 LACTBP83111 547 aaPredicted RBP21.62■■□□□ 1.05
LMO4-202ENST00000370544 KCTD1Q719H9 257 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 LRRC8AQ8IWT6 810 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 SULF1Q8IWU6 871 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 PARP2Q9UGN5 583 aa21.62■■□□□ 1.05
LMO4-202ENST00000370544 MAP3K4Q9Y6R4 1608 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 RASGRP4Q8TDF6 673 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 SOS2Q07890 1332 aaPredicted RBP21.61■■□□□ 1.05
LMO4-202ENST00000370544 ARAP3Q8WWN8 1544 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 PDE6CP51160 858 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 DBNDD1Q9H9R9 158 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 SPC25Q9HBM1 224 aa21.61■■□□□ 1.05
LMO4-202ENST00000370544 PLCB1Q9NQ66 1216 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms