RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 NACAP1Q9BZK3 213 aa17.52■□□□□ 0.4
LMO4-201ENST00000370542 GZF1Q9H116 711 aaPredicted RBP17.52■□□□□ 0.4
LMO4-201ENST00000370542 MYH4Q9Y623 1939 aa17.52■□□□□ 0.4
LMO4-201ENST00000370542 SYNGAP1Q96PV0 1343 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 TMEM265A0A087WTH1 108 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 SNX17Q15036 470 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 ZSCAN30Q86W11 494 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 MSL3Q8N5Y2 521 aaKnown RBP17.51■□□□□ 0.39
LMO4-201ENST00000370542 GMCL1P1Q8NEA9 526 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 CEP95Q96GE4 821 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 MMP19Q99542 508 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 NUP88Q99567 741 aaPredicted RBP17.51■□□□□ 0.39
LMO4-201ENST00000370542 TINF2Q9BSI4 451 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 TEX13BQ9BXU2 312 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 SENP6Q9GZR1 1112 aaPredicted RBP17.51■□□□□ 0.39
LMO4-201ENST00000370542 CLIP2Q9UDT6 1046 aa17.51■□□□□ 0.39
LMO4-201ENST00000370542 PLXNA1Q9UIW2 1896 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 DNAJC25-GNG10A0A024R161 153 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 PRDM1O75626 825 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 TTLL1O95922 423 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 APPP05067 770 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 MCM5P33992 734 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 NOVP48745 357 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 PRAMEF19Q5SWL8 479 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 C1orf53Q5VUE5 145 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 FSD1Q9BTV5 496 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 TTYH1Q9H313 450 aaPredicted RBP17.5■□□□□ 0.39
LMO4-201ENST00000370542 SLC38A10Q9HBR0 1119 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.5■□□□□ 0.39
LMO4-201ENST00000370542 RIPK3Q9Y572 518 aa17.5■□□□□ 0.39
LMO4-201ENST00000370542 OFD1O75665 1012 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 PGK2P07205 417 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 ZNF865P0CJ78 1059 aaPredicted RBP17.49■□□□□ 0.39
LMO4-201ENST00000370542 MSNP26038 577 aaKnown RBP17.49■□□□□ 0.39
LMO4-201ENST00000370542 PDE4BQ07343 736 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 PPARAQ07869 468 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 KCTD2Q14681 263 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 BMP2KLQ5H9B9 411 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 MAMDC4Q6UXC1 1216 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 TNPO1Q92973 898 aaKnown RBP17.49■□□□□ 0.39
LMO4-201ENST00000370542 ZMYND15Q9H091 742 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 ANAPC4Q9UJX5 808 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 FEM1BQ9UK73 627 aa17.49■□□□□ 0.39
LMO4-201ENST00000370542 FGRP09769 529 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 FDX1P10109 184 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 FOSL2P15408 326 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 OAZ1P54368 228 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 PDE1AP54750 535 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 NUCB1Q02818 461 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 LRRC41Q15345 812 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 ALX1Q15699 326 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 GJC2Q5T442 439 aaPredicted RBP17.48■□□□□ 0.39
LMO4-201ENST00000370542 SLC39A5Q6ZMH5 540 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 ZNF467Q7Z7K2 595 aaPredicted RBP17.48■□□□□ 0.39
LMO4-201ENST00000370542 EVI5LQ96CN4 794 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 NAPBQ9H115 298 aa17.48■□□□□ 0.39
LMO4-201ENST00000370542 ARIH1Q9Y4X5 557 aaPredicted RBP17.48■□□□□ 0.39
LMO4-201ENST00000370542 PLA2G6O60733 806 aa17.47■□□□□ 0.39
LMO4-201ENST00000370542 SLC3A2P08195 630 aaKnown RBP17.47■□□□□ 0.39
LMO4-201ENST00000370542 TFAP4Q01664 338 aa17.47■□□□□ 0.39
LMO4-201ENST00000370542 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
LMO4-201ENST00000370542 KLHL40Q2TBA0 621 aa17.47■□□□□ 0.39
LMO4-201ENST00000370542 ANKRD45Q5TZF3 282 aa17.47■□□□□ 0.39
LMO4-201ENST00000370542 SNRNP48Q6IEG0 339 aaKnown RBP17.47■□□□□ 0.39
LMO4-201ENST00000370542 SAMD1Q6SPF0 538 aaPredicted RBP17.47■□□□□ 0.39
LMO4-201ENST00000370542 KBTBD13C9JR72 458 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 K7ELQ4 463 aaPredicted RBP17.46■□□□□ 0.39
LMO4-201ENST00000370542 RAD21O60216 631 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 ZBED4O75132 1171 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 TSPY3P0CV98 308 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 TSPY8P0CW00 308 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 TAL1P17542 331 aaPredicted RBP17.46■□□□□ 0.39
LMO4-201ENST00000370542 RTP1P59025 263 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 NUCB2P80303 420 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 FAM47AQ5JRC9 791 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 PPP4R3BQ5MIZ7 849 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 ANO1Q5XXA6 986 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 GMCL1Q96IK5 515 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 HELLSQ9NRZ9 838 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 PHF24Q9UPV7 400 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 TACC3Q9Y6A5 838 aa17.46■□□□□ 0.39
LMO4-201ENST00000370542 SNAI1O95863 264 aaPredicted RBP17.45■□□□□ 0.38
LMO4-201ENST00000370542 BMP3P12645 472 aa17.45■□□□□ 0.38
LMO4-201ENST00000370542 NASPP49321 788 aaPredicted RBP17.45■□□□□ 0.38
LMO4-201ENST00000370542 ZNF445P59923 1031 aa17.45■□□□□ 0.38
LMO4-201ENST00000370542 SLFN13Q68D06 897 aa17.45■□□□□ 0.38
LMO4-201ENST00000370542 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
LMO4-201ENST00000370542 CHST13Q8NET6 341 aa17.45■□□□□ 0.38
LMO4-201ENST00000370542 FGD4Q96M96 766 aa17.45■□□□□ 0.38
LMO4-201ENST00000370542 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
LMO4-201ENST00000370542 BDP1A6H8Y1 2624 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 ORC4O43929 436 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 ADAMTS4O75173 837 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 RARBP10826 455 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 AKR1A1P14550 325 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 ATN1P54259 1190 aaPredicted RBP17.44■□□□□ 0.38
LMO4-201ENST00000370542 SMAD3P84022 425 aaKnown RBP17.44■□□□□ 0.38
LMO4-201ENST00000370542 VPS53Q5VIR6 699 aa17.44■□□□□ 0.38
LMO4-201ENST00000370542 LRRC47Q8N1G4 583 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms