RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 ATP2C1P98194 919 aaPredicted RBP14.46□□□□□ -0.09
CHD1L-202ENST00000369258 AMPD2Q01433 879 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 TMTC3Q6ZXV5 915 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 HEATR3Q7Z4Q2 680 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 ZNF34Q8IZ26 560 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 GLIS3Q8NEA6 775 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 FAM207AQ9NSI2 230 aaPredicted RBP14.46□□□□□ -0.09
CHD1L-202ENST00000369258 GNAT2P19087 354 aa14.46□□□□□ -0.1
CHD1L-202ENST00000369258 SLC35G1Q2M3R5 365 aa14.46□□□□□ -0.1
CHD1L-202ENST00000369258 ERFEQ4G0M1 354 aa14.46□□□□□ -0.1
CHD1L-202ENST00000369258 MKRN1Q9UHC7 482 aaKnown RBP14.46□□□□□ -0.1
CHD1L-202ENST00000369258 ADAMTSL3P82987 1691 aa14.46□□□□□ -0.1
CHD1L-202ENST00000369258 LRRC10BA6NIK2 292 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 RASSF10A6NK89 507 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 SYF2O95926 243 aaKnown RBP14.45□□□□□ -0.1
CHD1L-202ENST00000369258 STK4Q13043 487 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 WDR93Q6P2C0 686 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 LRRC31Q6UY01 552 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 CTCFLQ8NI51 663 aaPredicted RBP14.45□□□□□ -0.1
CHD1L-202ENST00000369258 COG1Q8WTW3 980 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 SAP30BPQ9UHR5 308 aaKnown RBP14.45□□□□□ -0.1
CHD1L-202ENST00000369258 RWDD2AQ9UIY3 292 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 STX8Q9UNK0 236 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 LUC7L2Q9Y383 392 aaKnown RBP14.45□□□□□ -0.1
CHD1L-202ENST00000369258 ZNF263O14978 683 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 RPS6KA5O75582 802 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 CRKLP46109 303 aaKnown RBP14.45□□□□□ -0.1
CHD1L-202ENST00000369258 RCAN1P53805 252 aa14.45□□□□□ -0.1
CHD1L-202ENST00000369258 TSR1Q2NL82 804 aaKnown RBP14.45□□□□□ -0.1
CHD1L-202ENST00000369258 ZSCAN5CA6NGD5 496 aaPredicted RBP14.44□□□□□ -0.1
CHD1L-202ENST00000369258 PRPF3O43395 683 aaKnown RBP14.44□□□□□ -0.1
CHD1L-202ENST00000369258 KCNQ2O43526 872 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 SCG2P13521 617 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 DIXDC1Q155Q3 683 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 GRIK5Q16478 980 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 IPO4Q8TEX9 1081 aaKnown RBP14.44□□□□□ -0.1
CHD1L-202ENST00000369258 JAKMIP2Q96AA8 810 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 MCM9Q9NXL9 1143 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 LRWD1Q9UFC0 647 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 CAPN6Q9Y6Q1 641 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 TNS2Q63HR2 1409 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 ESYT3A0FGR9 886 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 USP14P54578 494 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 MECOMQ03112 1051 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 ITPK1Q13572 414 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 MAP9Q49MG5 647 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 DYMQ7RTS9 669 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 MB21D1Q8N884 522 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 MTA3Q9BTC8 594 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 SLC39A2Q9NP94 309 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 DMGDHQ9UI17 866 aaKnown RBP14.44□□□□□ -0.1
CHD1L-202ENST00000369258 TOGARAM1Q9Y4F4 1720 aa14.44□□□□□ -0.1
CHD1L-202ENST00000369258 IDEP14735 1019 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 OR8K1Q8NGG5 319 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 AFAP1L1Q8TED9 768 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 RTL9Q8NET4 1388 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 BUB1O43683 1085 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 GTPBP6O43824 516 aaPredicted RBP14.43□□□□□ -0.1
CHD1L-202ENST00000369258 SLURP2P0DP57 97 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 MCM3P25205 808 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 PPP2R5BQ15173 497 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 LRRC41Q15345 812 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 LETM2Q2VYF4 491 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 KCTD16Q68DU8 428 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 INTS5Q6P9B9 1019 aaKnown RBP14.43□□□□□ -0.1
CHD1L-202ENST00000369258 TRAPPC11Q7Z392 1133 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 CSGALNACT2Q8N6G5 542 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 MS4A14Q96JA4 679 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 FAM84BQ96KN1 310 aaPredicted RBP14.43□□□□□ -0.1
CHD1L-202ENST00000369258 HAUS4Q9H6D7 363 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 SLAIN2Q9P270 581 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 SAR1BQ9Y6B6 198 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 MOCS3O95396 460 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 TFAP4Q01664 338 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 ZNF658Q5TYW1 1059 aaPredicted RBP14.43□□□□□ -0.1
CHD1L-202ENST00000369258 ANKRD40Q6AI12 368 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 NFRKBQ6P4R8 1299 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 PTF1AQ7RTS3 328 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 EFCC1Q9HA90 598 aa14.43□□□□□ -0.1
CHD1L-202ENST00000369258 LRP6O75581 1613 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 PNPLA7Q6ZV29 1317 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 EIF3CLB5ME19 914 aaKnown RBP14.42□□□□□ -0.1
CHD1L-202ENST00000369258 CYTH3O43739 400 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 ADAMTS2O95450 1211 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 ARID5AQ03989 594 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 TBC1D8BQ0IIM8 1120 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 TRADDQ15628 312 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 CCDC152Q4G0S7 254 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 EIF3CQ99613 913 aaKnown RBP14.42□□□□□ -0.1
CHD1L-202ENST00000369258 VIPAS39Q9H9C1 493 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 NHEJ1Q9H9Q4 299 aaPredicted RBP14.42□□□□□ -0.1
CHD1L-202ENST00000369258 DCP1AQ9NPI6 582 aaPredicted RBP14.42□□□□□ -0.1
CHD1L-202ENST00000369258 SALL4Q9UJQ4 1053 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 UBA7P41226 1012 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 TECP42680 631 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 CCDC96Q2M329 555 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 RCSD1Q6JBY9 416 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 CLEC10AQ8IUN9 316 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 TUBGCP2Q9BSJ2 902 aa14.42□□□□□ -0.1
CHD1L-202ENST00000369258 LRRC1Q9BTT6 524 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms