RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 HMGCRP04035 888 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 HAND2P61296 217 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 SEC23AQ15436 765 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 CCL14Q16627 93 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 WDR78Q5VTH9 848 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 TTC6Q86TZ1 520 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 METTL16Q86W50 562 aaKnown RBP10.24□□□□□ -0.77
SNX27-201ENST00000368838 DGKHQ86XP1 1220 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 PARP9Q8IXQ6 854 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 C7orf61Q8IZ16 206 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 GPRC5AQ8NFJ5 357 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 SLKQ9H2G2 1235 aaPredicted RBP10.24□□□□□ -0.77
SNX27-201ENST00000368838 NR2E3Q9Y5X4 410 aa10.24□□□□□ -0.77
SNX27-201ENST00000368838 A0A0G2JMZ2 1700 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 C2orf72A6NCS6 295 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 C19orf81C9J6K1 198 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 POLR3DP05423 398 aaPredicted RBP10.23□□□□□ -0.77
SNX27-201ENST00000368838 CYP2D6P10635 497 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 CPA1P15085 419 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 SYN1P17600 705 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 HOXA7P31268 230 aaPredicted RBP10.23□□□□□ -0.77
SNX27-201ENST00000368838 PLCD1P51178 756 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 ERVK-9P63128 1117 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 ERVK-24P63145 666 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 GABPAQ06546 454 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 COL9A3Q14050 684 aaPredicted RBP10.23□□□□□ -0.77
SNX27-201ENST00000368838 ABCB5Q2M3G0 1257 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 USP17L2Q6R6M4 530 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 IQCA1Q86XH1 822 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 CCAR1Q8IX12 1150 aaKnown RBP10.23□□□□□ -0.77
SNX27-201ENST00000368838 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
SNX27-201ENST00000368838 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
SNX27-201ENST00000368838 TMC2Q8TDI7 906 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 HMX1Q9NP08 348 aaPredicted RBP10.23□□□□□ -0.77
SNX27-201ENST00000368838 SWAP70Q9UH65 585 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 ZMYND8Q9ULU4 1186 aaPredicted RBP10.23□□□□□ -0.77
SNX27-201ENST00000368838 SMC3Q9UQE7 1217 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 PLIN4Q96Q06 1357 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 MCM3APO60318 1980 aa10.23□□□□□ -0.77
SNX27-201ENST00000368838 NEDD4P46934 1319 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 RPTORQ8N122 1335 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 CCDC196A0A1B0GTZ2 297 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 B4E1Z4 1266 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 SMIM22K7EJ46 135 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 MPHOSPH10O00566 681 aaKnown RBP10.22□□□□□ -0.77
SNX27-201ENST00000368838 LARGE1O95461 756 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 CALM1P0DP23 149 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 CALM2P0DP24 149 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 CALM3P0DP25 149 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 CCND3P30281 292 aaPredicted RBP10.22□□□□□ -0.77
SNX27-201ENST00000368838 SHMT1P34896 483 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 MAP2K5Q13163 448 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 CERKLQ49MI3 558 aaPredicted RBP10.22□□□□□ -0.77
SNX27-201ENST00000368838 TATDN1Q6P1N9 297 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 APOA5Q6Q788 366 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 C16orf86Q6ZW13 317 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 CYB5R4Q7L1T6 521 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 GPR142Q7Z601 462 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 NECAB2Q7Z6G3 386 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 CLEC10AQ8IUN9 316 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 GBP4Q96PP9 640 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 ARID3AQ99856 593 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 NUDT12Q9BQG2 462 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 LY9Q9HBG7 655 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 MCM9Q9NXL9 1143 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 ATP6V1DQ9Y5K8 247 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 TACC3Q9Y6A5 838 aa10.22□□□□□ -0.77
SNX27-201ENST00000368838 STK36Q9NRP7 1315 aa10.21□□□□□ -0.77
SNX27-201ENST00000368838 DNAH12Q6ZR08 3092 aa10.21□□□□□ -0.77
SNX27-201ENST00000368838 ERICH2A1L162 156 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 SOX1O00570 391 aaPredicted RBP10.21□□□□□ -0.78
SNX27-201ENST00000368838 KDM4AO75164 1064 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 CNMDO75829 334 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 CDKL5O76039 1030 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 SYT1P21579 422 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 GUCY1A2P33402 732 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 FGD1P98174 961 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 CACNB2Q08289 660 aaPredicted RBP10.21□□□□□ -0.78
SNX27-201ENST00000368838 SCRN1Q12765 414 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 SEPT2Q15019 361 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 CPLX2Q6PUV4 134 aaKnown RBP10.21□□□□□ -0.78
SNX27-201ENST00000368838 NSUN7Q8NE18 718 aaKnown RBP10.21□□□□□ -0.78
SNX27-201ENST00000368838 TNPO1Q92973 898 aaKnown RBP10.21□□□□□ -0.78
SNX27-201ENST00000368838 ZSCAN10Q96SZ4 725 aaPredicted RBP10.21□□□□□ -0.78
SNX27-201ENST00000368838 SYNPO2Q9UMS6 1093 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 ZDHHC9Q9Y397 364 aa10.21□□□□□ -0.78
SNX27-201ENST00000368838 CYP2D7A0A087X1C5 515 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 C19orf67A6NJJ6 358 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 DDX11L8A8MPP1 907 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 MINDY4BA8MYZ0 360 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 USP17L15C9J2P7 530 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 USP17L13C9JLJ4 530 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 USP17L11C9JVI0 530 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 USP17L18D6R9N7 530 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 USP17L22D6RA61 530 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 USP17L17D6RBQ6 530 aa10.2□□□□□ -0.78
SNX27-201ENST00000368838 USP17L19D6RCP7 530 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms