RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 SPRED2Q7Z698 418 aa12.79□□□□□ -0.36
TUBE1-201ENST00000368657 KLHDC4Q8TBB5 520 aa12.79□□□□□ -0.36
TUBE1-201ENST00000368657 SLC39A7Q92504 469 aa12.79□□□□□ -0.36
TUBE1-201ENST00000368657 NKD2Q969F2 451 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-201ENST00000368657 ZBED2Q9BTP6 218 aa12.79□□□□□ -0.36
TUBE1-201ENST00000368657 SRCIN1Q9C0H9 1055 aa12.79□□□□□ -0.36
TUBE1-201ENST00000368657 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
TUBE1-201ENST00000368657 TNKSO95271 1327 aa12.79□□□□□ -0.36
TUBE1-201ENST00000368657 COL4A4P53420 1690 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-201ENST00000368657 COL4A6Q14031 1691 aa12.78□□□□□ -0.36
TUBE1-201ENST00000368657 B4GALT4O60513 344 aa12.78□□□□□ -0.36
TUBE1-201ENST00000368657 BAIAP3O94812 1187 aa12.78□□□□□ -0.36
TUBE1-201ENST00000368657 SNAI1O95863 264 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-201ENST00000368657 HLA-DOAP06340 250 aa12.78□□□□□ -0.36
TUBE1-201ENST00000368657 NBPF7P0C2Y1 421 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-201ENST00000368657 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-201ENST00000368657 COL9A2Q14055 689 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-201ENST00000368657 RAB3GAP1Q15042 981 aa12.78□□□□□ -0.36
TUBE1-201ENST00000368657 MAMDC4Q6UXC1 1216 aa12.78□□□□□ -0.36
TUBE1-201ENST00000368657 NOL10Q9BSC4 688 aaKnown RBP12.78□□□□□ -0.36
TUBE1-201ENST00000368657 CEP126Q9P2H0 1117 aa12.78□□□□□ -0.36
TUBE1-201ENST00000368657 ADAMTS8Q9UP79 889 aa12.78□□□□□ -0.36
TUBE1-201ENST00000368657 KMT2EQ8IZD2 1858 aa12.78□□□□□ -0.36
TUBE1-201ENST00000368657 BAG3O95817 575 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 PLCG2P16885 1265 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 KCNJ6P48051 423 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 VCPP55072 806 aaKnown RBP12.77□□□□□ -0.37
TUBE1-201ENST00000368657 SIGLEC14Q08ET2 396 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 ACVR2BQ13705 512 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 PUM1Q14671 1186 aaKnown RBP eCLIP12.77□□□□□ -0.37
TUBE1-201ENST00000368657 COL19A1Q14993 1142 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 CCDC102BQ68D86 513 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 MCTP2Q6DN12 878 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 TATDN1Q6P1N9 297 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 EP400NLQ6ZTU2 488 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 ANKRD44Q8N8A2 993 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 ACER1Q8TDN7 264 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 ZNF384Q8TF68 577 aa12.77□□□□□ -0.37
TUBE1-201ENST00000368657 NSUN4Q96CB9 384 aaKnown RBP12.77□□□□□ -0.37
TUBE1-201ENST00000368657 MRPL38Q96DV4 380 aaKnown RBP12.77□□□□□ -0.37
TUBE1-201ENST00000368657 ZHX1Q9UKY1 873 aaPredicted RBP12.77□□□□□ -0.37
TUBE1-201ENST00000368657 LCHNA4D1U4 455 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 RASGRF1Q13972 1273 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 TIGD5Q53EQ6 642 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 CXCL17Q6UXB2 119 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 SH3RF3Q8TEJ3 882 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-201ENST00000368657 TSR2Q969E8 191 aaKnown RBP12.76□□□□□ -0.37
TUBE1-201ENST00000368657 RMDN1Q96DB5 314 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 RAD9AQ99638 391 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 FTOQ9C0B1 505 aaKnown RBP eCLIP12.76□□□□□ -0.37
TUBE1-201ENST00000368657 TANGO6Q9C0B7 1094 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 ABHD16BQ9H3Z7 469 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 CABP5Q9NP86 173 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 MTUS1Q9ULD2 1270 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 PALD1Q9ULE6 856 aa12.76□□□□□ -0.37
TUBE1-201ENST00000368657 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
TUBE1-201ENST00000368657 STXBP3O00186 592 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 APAF1O14727 1248 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 CTAGE5O15320 804 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 GRIN2DO15399 1336 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 ZEB2O60315 1214 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 DMDP11532 3685 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 COPB2P35606 906 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 CCDC144BQ3MJ40 725 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 ATG9AQ7Z3C6 839 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 RIOX2Q8IUF8 465 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 BANK1Q8NDB2 785 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 TGFBRAP1Q8WUH2 860 aa12.75□□□□□ -0.37
TUBE1-201ENST00000368657 SIPA1L1O43166 1804 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 MBTPS2O43462 519 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 KDM4AO75164 1064 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 C7P10643 843 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 RALBP1Q15311 655 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 ST3GAL2Q16842 350 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 ABCB5Q2M3G0 1257 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 SLC4A10Q6U841 1118 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-201ENST00000368657 MAPKAPK5Q8IW41 473 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 FBXO22Q8NEZ5 403 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 ATRXP46100 2492 aa12.74□□□□□ -0.37
TUBE1-201ENST00000368657 CFAP47Q6ZTR5 3102 aa12.73□□□□□ -0.37
TUBE1-201ENST00000368657 LINC01553A4QN01 128 aa12.73□□□□□ -0.37
TUBE1-201ENST00000368657 FLOT1O75955 427 aa12.73□□□□□ -0.37
TUBE1-201ENST00000368657 PPP4CP60510 307 aa12.73□□□□□ -0.37
TUBE1-201ENST00000368657 TMEM132BQ14DG7 1078 aa12.73□□□□□ -0.37
TUBE1-201ENST00000368657 CERKLQ49MI3 558 aaPredicted RBP12.73□□□□□ -0.37
TUBE1-201ENST00000368657 RETREG2Q8NC44 543 aa12.73□□□□□ -0.37
TUBE1-201ENST00000368657 ALDH8A1Q9H2A2 487 aaPredicted RBP12.73□□□□□ -0.37
TUBE1-201ENST00000368657 CLDND1Q9NY35 253 aa12.73□□□□□ -0.37
TUBE1-201ENST00000368657 CHD6Q8TD26 2715 aa12.73□□□□□ -0.37
TUBE1-201ENST00000368657 FLT1P17948 1338 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 ADCY6O43306 1168 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 CIAO1O76071 339 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 STAT3P40763 770 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 BEX3Q00994 111 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 ACAP1Q15027 740 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 MAGEB6Q8N7X4 407 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 ATG4CQ96DT6 458 aa12.72□□□□□ -0.37
TUBE1-201ENST00000368657 DDX11Q96FC9 970 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms