RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 WDR46O15213 610 aaKnown RBP11.69□□□□□ -0.54
TPM3-210ENST00000368530 GPAA1O43292 621 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 CYP21A2P08686 494 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 EEF2P13639 858 aaKnown RBP11.69□□□□□ -0.54
TPM3-210ENST00000368530 TAL1P17542 331 aaPredicted RBP11.69□□□□□ -0.54
TPM3-210ENST00000368530 PSMA5P28066 241 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 PLS1Q14651 629 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 ZNF792Q3KQV3 632 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 BLOC1S2Q6QNY1 142 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 C16orf86Q6ZW13 317 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 RUFY3Q7L099 469 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 BADQ92934 168 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 TCEANC2Q96MN5 208 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 FAM161BQ96MY7 647 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 DSCC1Q9BVC3 393 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 TM6SF1Q9BZW5 370 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 ARHGEF10LQ9HCE6 1279 aa11.69□□□□□ -0.54
TPM3-210ENST00000368530 ZNF214Q9UL59 606 aaPredicted RBP11.69□□□□□ -0.54
TPM3-210ENST00000368530 EYSQ5T1H1 3165 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 KBTBD13C9JR72 458 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 SLC25A27O95847 323 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 ZNF865P0CJ78 1059 aaPredicted RBP11.68□□□□□ -0.54
TPM3-210ENST00000368530 FCER1AP12319 257 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 CTR9Q6PD62 1173 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 RIOX2Q8IUF8 465 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 FERMT2Q96AC1 680 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 SEMA6BQ9H3T3 888 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 SLC5A4Q9NY91 659 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 PHF24Q9UPV7 400 aa11.68□□□□□ -0.54
TPM3-210ENST00000368530 VWA5AO00534 786 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 PGK2P07205 417 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 EPHB4P54760 987 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 TLE2Q04725 743 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 KRT32Q14532 448 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.67□□□□□ -0.54
TPM3-210ENST00000368530 CDX2Q99626 313 aaPredicted RBP11.67□□□□□ -0.54
TPM3-210ENST00000368530 TINF2Q9BSI4 451 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 TTYH1Q9H313 450 aaPredicted RBP11.67□□□□□ -0.54
TPM3-210ENST00000368530 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 KANSL2Q9H9L4 492 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 PRKAG2Q9UGJ0 569 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
TPM3-210ENST00000368530 DIS3Q9Y2L1 958 aaKnown RBP11.67□□□□□ -0.54
TPM3-210ENST00000368530 VCANP13611 3396 aa11.67□□□□□ -0.54
TPM3-210ENST00000368530 PARP14Q460N5 1801 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 FOXP2O15409 715 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 LARGE1O95461 756 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 RPS6KB1P23443 525 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 STAT3P40763 770 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 HAND2P61296 217 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 CUL4AQ13619 759 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 STOX1Q6ZVD7 989 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 XPNPEP3Q9NQH7 507 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 PPP1R9AQ9ULJ8 1098 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 LIMCH1Q9UPQ0 1083 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
TPM3-210ENST00000368530 ADAMTS4O75173 837 aa11.65□□□□□ -0.54
TPM3-210ENST00000368530 PGK1P00558 417 aa11.65□□□□□ -0.54
TPM3-210ENST00000368530 APPP05067 770 aa11.65□□□□□ -0.54
TPM3-210ENST00000368530 SMAD3P84022 425 aaKnown RBP11.65□□□□□ -0.54
TPM3-210ENST00000368530 TSGA10IPQ3SY00 556 aa11.65□□□□□ -0.54
TPM3-210ENST00000368530 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.54
TPM3-210ENST00000368530 NEK1Q96PY6 1258 aa11.65□□□□□ -0.54
TPM3-210ENST00000368530 MMP19Q99542 508 aa11.65□□□□□ -0.54
TPM3-210ENST00000368530 CDH23Q9H251 3354 aa11.65□□□□□ -0.54
TPM3-210ENST00000368530 PRDM5Q9NQX1 630 aaPredicted RBP11.65□□□□□ -0.54
TPM3-210ENST00000368530 SMCHD1A6NHR9 2005 aa11.65□□□□□ -0.54
TPM3-210ENST00000368530 DNAJC25-GNG10A0A024R161 153 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 KIAA0355O15063 1070 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 SNAI1O95863 264 aaPredicted RBP11.65□□□□□ -0.55
TPM3-210ENST00000368530 RARBP10826 455 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 SBK1Q52WX2 424 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 FAM83BQ5T0W9 1011 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 CCSAPQ6IQ19 270 aaPredicted RBP11.65□□□□□ -0.55
TPM3-210ENST00000368530 KLHDC9Q8NEP7 349 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 TNPO1Q92973 898 aaKnown RBP11.65□□□□□ -0.55
TPM3-210ENST00000368530 LENG1Q96BZ8 264 aaPredicted RBP11.65□□□□□ -0.55
TPM3-210ENST00000368530 STRBPQ96SI9 672 aaKnown RBP11.65□□□□□ -0.55
TPM3-210ENST00000368530 CTNNA3Q9UI47 895 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 RIPK3Q9Y572 518 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 TACC3Q9Y6A5 838 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 SLC4A4Q9Y6R1 1079 aa11.65□□□□□ -0.55
TPM3-210ENST00000368530 SPTBN5Q9NRC6 3674 aaKnown RBP11.65□□□□□ -0.55
TPM3-210ENST00000368530 PRUNE2Q8WUY3 3088 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 BAZ2AQ9UIF9 1905 aaKnown RBP11.64□□□□□ -0.55
TPM3-210ENST00000368530 A0A1W2PQ45 241 aaPredicted RBP11.64□□□□□ -0.55
TPM3-210ENST00000368530 A0A1W2PQY0 241 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 GSG1L2A8MUP6 293 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 E7EWF7 191 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 DTNBO60941 627 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 FGAP02671 866 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 RASA1P20936 1047 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 FAAP100Q0VG06 881 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 PKP1Q13835 747 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 KCTD2Q14681 263 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 IMMTQ16891 758 aaKnown RBP11.64□□□□□ -0.55
TPM3-210ENST00000368530 MAMDC4Q6UXC1 1216 aa11.64□□□□□ -0.55
TPM3-210ENST00000368530 CCDC83Q8IWF9 413 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms