RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 CNNM4Q6P4Q7 775 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 SLC8A2Q9UPR5 921 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 NALCNQ8IZF0 1738 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 IDEP14735 1019 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 SP3Q02447 781 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 GOLGA8FQ08AF8 430 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 GOLGA8DPQ0D2H9 430 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 FBXO33Q7Z6M2 555 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 IQUBQ8NA54 791 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 RIPOR2Q9Y4F9 1068 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 NWD2Q9ULI1 1742 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 GH2P01242 217 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 VIL1P09327 827 aaKnown RBP9.28□□□□□ -0.92
SSR2-202ENST00000368311 EPB41P11171 864 aaKnown RBP9.28□□□□□ -0.92
SSR2-202ENST00000368311 GAP43P17677 238 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 MKRN3Q13064 507 aaKnown RBP9.28□□□□□ -0.92
SSR2-202ENST00000368311 TRERF1Q96PN7 1200 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 TIPINQ9BVW5 301 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 NACA2Q9H009 215 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 FOXD4L1Q9NU39 408 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 UBE2Q2Q8WVN8 375 aa9.27□□□□□ -0.92
SSR2-202ENST00000368311 ZNF274Q96GC6 653 aaPredicted RBP9.27□□□□□ -0.92
SSR2-202ENST00000368311 RPAP3Q9H6T3 665 aaPredicted RBP9.27□□□□□ -0.92
SSR2-202ENST00000368311 SMCO2A6NFE2 343 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 B4E1Z4 1266 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 NPM3O75607 178 aaKnown RBP9.27□□□□□ -0.93
SSR2-202ENST00000368311 PTPN12Q05209 780 aaKnown RBP9.27□□□□□ -0.93
SSR2-202ENST00000368311 CXCL9Q07325 125 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 SPP2Q13103 211 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 DMP1Q13316 513 aaPredicted RBP9.27□□□□□ -0.93
SSR2-202ENST00000368311 POLA2Q14181 598 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 CACNA2D4Q7Z3S7 1137 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 CCDC26Q8TAB7 109 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 ANKRD26Q9UPS8 1709 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 BCL9LQ86UU0 1499 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 NDC80O14777 642 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 MAGEB2O15479 319 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 RPS6KB1P23443 525 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 IER5Q5VY09 327 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 EP400NLQ6ZTU2 488 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 ZNF654Q8IZM8 581 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 CUEDC2Q9H467 287 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 RNF146Q9NTX7 359 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 PRPF6O94906 941 aaKnown RBP9.27□□□□□ -0.93
SSR2-202ENST00000368311 PAX3P23760 479 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 CHMLP26374 656 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 PHKA2P46019 1235 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 ARID5AQ03989 594 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 GPS2Q13227 327 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 METTL13Q8N6R0 699 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 FAM84BQ96KN1 310 aaPredicted RBP9.27□□□□□ -0.93
SSR2-202ENST00000368311 PRDM5Q9NQX1 630 aaPredicted RBP9.27□□□□□ -0.93
SSR2-202ENST00000368311 STAP2Q9UGK3 403 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 MYPNQ86TC9 1320 aa9.27□□□□□ -0.93
SSR2-202ENST00000368311 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 ORC4O43929 436 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 GNA14O95837 355 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 SMARCA1P28370 1054 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 PPP4CP60510 307 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 LAMC2Q13753 1193 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 MIGA2Q7L4E1 593 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 MSL3Q8N5Y2 521 aaKnown RBP9.26□□□□□ -0.93
SSR2-202ENST00000368311 OR6J1Q8NGC5 347 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 RWDD3Q9Y3V2 267 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 GOLGA6L3A6NEY3 463 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 GDF11O95390 407 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 CREMQ03060 361 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 UTP14CQ5TAP6 766 aaKnown RBP9.26□□□□□ -0.93
SSR2-202ENST00000368311 NSMCE1Q8WV22 266 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 RSPH1Q8WYR4 309 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 TOPORSQ9NS56 1045 aaPredicted RBP9.26□□□□□ -0.93
SSR2-202ENST00000368311 SEPT11Q9NVA2 429 aaKnown RBP9.26□□□□□ -0.93
SSR2-202ENST00000368311 SLC45A1Q9Y2W3 748 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 DAGLAQ9Y4D2 1042 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 CCDC169A6NNP5 214 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 F8W8V4 182 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 RASGRF1Q13972 1273 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 SKIV2LQ15477 1246 aaKnown RBP9.26□□□□□ -0.93
SSR2-202ENST00000368311 CCDC181Q5TID7 509 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 FILIP1Q7Z7B0 1213 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 THEM5Q8N1Q8 247 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 EDC3Q96F86 508 aaKnown RBP9.26□□□□□ -0.93
SSR2-202ENST00000368311 DENND3A2RUS2 1198 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 TRAPPC3O43617 180 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 SERPINC1P01008 464 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 POLR2BP30876 1174 aaKnown RBP9.26□□□□□ -0.93
SSR2-202ENST00000368311 CUL4BQ13620 913 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
SSR2-202ENST00000368311 FOXD4L4Q8WXT5 416 aaPredicted RBP9.26□□□□□ -0.93
SSR2-202ENST00000368311 TAF4BQ92750 862 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 TRIM62Q9BVG3 475 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 NUP62CLQ9H1M0 184 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 TRIM17Q9Y577 477 aa9.26□□□□□ -0.93
SSR2-202ENST00000368311 SLC15A5A6NIM6 579 aa9.25□□□□□ -0.93
SSR2-202ENST00000368311 CCT2P78371 535 aaKnown RBP9.25□□□□□ -0.93
SSR2-202ENST00000368311 NOLC1Q14978 699 aaKnown RBP eCLIP9.25□□□□□ -0.93
SSR2-202ENST00000368311 SEPT2Q15019 361 aa9.25□□□□□ -0.93
SSR2-202ENST00000368311 TNS4Q8IZW8 715 aa9.25□□□□□ -0.93
SSR2-202ENST00000368311 TMEM199Q8N511 208 aa9.25□□□□□ -0.93
SSR2-202ENST00000368311 RDM1Q8NG50 284 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms