RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 TYW1BQ6NUM6 668 aa18.26■□□□□ 0.51
LMNA-203ENST00000368297 FBXO11Q86XK2 927 aa18.26■□□□□ 0.51
LMNA-203ENST00000368297 OXER1Q8TDS5 423 aa18.26■□□□□ 0.51
LMNA-203ENST00000368297 GZF1Q9H116 711 aaPredicted RBP18.26■□□□□ 0.51
LMNA-203ENST00000368297 C6orf50Q9HD87 102 aa18.26■□□□□ 0.51
LMNA-203ENST00000368297 CNPY2Q9Y2B0 182 aa18.26■□□□□ 0.51
LMNA-203ENST00000368297 TRPM7Q96QT4 1865 aa18.26■□□□□ 0.51
LMNA-203ENST00000368297 SMCO2A6NFE2 343 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 IRF6O14896 467 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
LMNA-203ENST00000368297 NR5A1Q13285 461 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 GALNT17Q6IS24 598 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 PPP1R18Q6NYC8 613 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 CCDC174Q6PII3 467 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 GADL1Q6ZQY3 521 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 NOSTRINQ8IVI9 506 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 BLIDQ8IZY5 108 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 PRPF38AQ8NAV1 312 aaKnown RBP18.25■□□□□ 0.51
LMNA-203ENST00000368297 ZNF396Q96N95 335 aaPredicted RBP18.25■□□□□ 0.51
LMNA-203ENST00000368297 AMNQ9BXJ7 453 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 PCDHA4Q9UN74 947 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 CTDP1Q9Y5B0 961 aaPredicted RBP18.25■□□□□ 0.51
LMNA-203ENST00000368297 CXCL11O14625 94 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 PTPRFP10586 1907 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 KRT85P78386 507 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 RANBP17Q9H2T7 1088 aaKnown RBP18.25■□□□□ 0.51
LMNA-203ENST00000368297 TFIP11Q9UBB9 837 aaKnown RBP18.25■□□□□ 0.51
LMNA-203ENST00000368297 PCDHA1Q9Y5I3 950 aa18.25■□□□□ 0.51
LMNA-203ENST00000368297 GNA11P29992 359 aa18.24■□□□□ 0.51
LMNA-203ENST00000368297 ADCY7P51828 1080 aa18.24■□□□□ 0.51
LMNA-203ENST00000368297 TRAF1Q13077 416 aa18.24■□□□□ 0.51
LMNA-203ENST00000368297 USH1GQ495M9 461 aa18.24■□□□□ 0.51
LMNA-203ENST00000368297 TMEM87AQ8NBN3 555 aa18.24■□□□□ 0.51
LMNA-203ENST00000368297 ZMYND12Q9H0C1 365 aa18.24■□□□□ 0.51
LMNA-203ENST00000368297 PPP1R9AQ9ULJ8 1098 aa18.24■□□□□ 0.51
LMNA-203ENST00000368297 TCHHQ07283 1943 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 USP17L15C9J2P7 530 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 USP17L13C9JLJ4 530 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 USP17L11C9JVI0 530 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 USP17L18D6R9N7 530 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 USP17L22D6RA61 530 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 USP17L17D6RBQ6 530 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 USP17L19D6RCP7 530 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 USP17L20D6RJB6 530 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 FIBPO43427 364 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 USP17L24Q0WX57 530 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 NPY5RQ15761 445 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 MYSM1Q5VVJ2 828 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 DAGLBQ8NCG7 672 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 KCNH4Q9UQ05 1017 aa18.23■□□□□ 0.51
LMNA-203ENST00000368297 LOC285556D6RIA3 1793 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 A0A0G2JLL6 359 aaPredicted RBP18.22■□□□□ 0.51
LMNA-203ENST00000368297 ESYT2A0FGR8 921 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 CST9Q5W186 159 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 PRRT2Q7Z6L0 340 aaPredicted RBP18.22■□□□□ 0.51
LMNA-203ENST00000368297 BICD2Q8TD16 824 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 GDPD2Q9HCC8 539 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 CFAP45Q9UL16 551 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 KIF3CO14782 793 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 ZBED4O75132 1171 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 CEBPZQ03701 1054 aaKnown RBP18.22■□□□□ 0.51
LMNA-203ENST00000368297 ATL3Q6DD88 541 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 CATSPERGQ6ZRH7 1159 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 PROCA1Q8NCQ7 364 aaPredicted RBP18.22■□□□□ 0.51
LMNA-203ENST00000368297 WNK4Q96J92 1243 aa18.22■□□□□ 0.51
LMNA-203ENST00000368297 PARP14Q460N5 1801 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 ADAMTS3O15072 1205 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 GJA5P36382 358 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 SNAPC2Q13487 334 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 COG2Q14746 738 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 TREML2Q5T2D2 321 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 L1TD1Q5T7N2 865 aaKnown RBP18.21■□□□□ 0.51
LMNA-203ENST00000368297 SMC1BQ8NDV3 1235 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 RASGRP4Q8TDF6 673 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 CUL5Q93034 780 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 TNFRSF25Q93038 417 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 ATG4CQ96DT6 458 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 RIC8AQ9NPQ8 531 aa18.21■□□□□ 0.51
LMNA-203ENST00000368297 NOL7Q9UMY1 257 aaKnown RBP18.21■□□□□ 0.51
LMNA-203ENST00000368297 CCDC194A0A1B0GVG4 234 aa18.2■□□□□ 0.5
LMNA-203ENST00000368297 FDX1P10109 184 aa18.2■□□□□ 0.5
LMNA-203ENST00000368297 TAL1P17542 331 aaPredicted RBP18.2■□□□□ 0.5
LMNA-203ENST00000368297 MRPL12P52815 198 aaKnown RBP18.2■□□□□ 0.5
LMNA-203ENST00000368297 HUNKP57058 714 aa18.2■□□□□ 0.5
LMNA-203ENST00000368297 PIK3AP1Q6ZUJ8 805 aa18.2■□□□□ 0.5
LMNA-203ENST00000368297 FASTKD5Q7L8L6 764 aaKnown RBP18.2■□□□□ 0.5
LMNA-203ENST00000368297 REXO1Q8N1G1 1221 aaKnown RBP18.2■□□□□ 0.5
LMNA-203ENST00000368297 SYAP1Q96A49 352 aaPredicted RBP18.2■□□□□ 0.5
LMNA-203ENST00000368297 SPATA32Q96LK8 384 aa18.2■□□□□ 0.5
LMNA-203ENST00000368297 USP28Q96RU2 1077 aa18.2■□□□□ 0.5
LMNA-203ENST00000368297 SCAND2PQ9GZW5 306 aaPredicted RBP18.2■□□□□ 0.5
LMNA-203ENST00000368297 PSTPIP2Q9H939 334 aa18.2■□□□□ 0.5
LMNA-203ENST00000368297 PCDHA6Q9UN73 950 aa18.2■□□□□ 0.5
LMNA-203ENST00000368297 PCDHA8Q9Y5H6 950 aa18.2■□□□□ 0.5
LMNA-203ENST00000368297 FAM205CA6NFA0 338 aa18.19■□□□□ 0.5
LMNA-203ENST00000368297 ATP2B1P20020 1258 aa18.19■□□□□ 0.5
LMNA-203ENST00000368297 DSG3P32926 999 aa18.19■□□□□ 0.5
LMNA-203ENST00000368297 MKRN3Q13064 507 aaKnown RBP18.19■□□□□ 0.5
LMNA-203ENST00000368297 CPXCR1Q8N123 301 aa18.19■□□□□ 0.5
LMNA-203ENST00000368297 FTOQ9C0B1 505 aaKnown RBP eCLIP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms