RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 OAZ1P54368 228 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 IKQ13123 557 aaPredicted RBP11.58□□□□□ -0.56
CD48-202ENST00000368046 CCL14Q16627 93 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 KCTD1Q719H9 257 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 CPXCR1Q8N123 301 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 TRIB2Q92519 343 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 CHMP4CQ96CF2 233 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 APBA2Q99767 749 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 TEX13BQ9BXU2 312 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 UNC93B1Q9H1C4 597 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 RAVER2Q9HCJ3 691 aaKnown RBP11.58□□□□□ -0.56
CD48-202ENST00000368046 HMX1Q9NP08 348 aaPredicted RBP11.58□□□□□ -0.56
CD48-202ENST00000368046 ISY1Q9ULR0 285 aaKnown RBP11.58□□□□□ -0.56
CD48-202ENST00000368046 MTMR7Q9Y216 660 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 MYH8P13535 1937 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 HTTP42858 3142 aa11.58□□□□□ -0.56
CD48-202ENST00000368046 COBLO75128 1261 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 SNHG28P0DPA3 235 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 ZKSCAN1P17029 563 aaPredicted RBP11.57□□□□□ -0.56
CD48-202ENST00000368046 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 CACNB2Q08289 660 aaPredicted RBP11.57□□□□□ -0.56
CD48-202ENST00000368046 TRIM32Q13049 653 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 KCTD2Q14681 263 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 MAP3K21Q5TCX8 1036 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 SNRNP48Q6IEG0 339 aaKnown RBP11.57□□□□□ -0.56
CD48-202ENST00000368046 CASC1Q6TDU7 716 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 BTNL9Q6UXG8 535 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 NPLOC4Q8TAT6 608 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 U2AF1L4Q8WU68 220 aaKnown RBP11.57□□□□□ -0.56
CD48-202ENST00000368046 RNF166Q96A37 237 aaPredicted RBP11.57□□□□□ -0.56
CD48-202ENST00000368046 LSG1Q9H089 658 aaKnown RBP11.57□□□□□ -0.56
CD48-202ENST00000368046 KAT14Q9H8E8 782 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 RIPK3Q9Y572 518 aa11.57□□□□□ -0.56
CD48-202ENST00000368046 RBM8AQ9Y5S9 174 aaKnown RBP11.57□□□□□ -0.56
CD48-202ENST00000368046 E7EWF7 191 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 IGHA2P01877 340 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 TFRCP02786 760 aaKnown RBP11.56□□□□□ -0.56
CD48-202ENST00000368046 PDHBP11177 359 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 NECTIN1Q15223 517 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 CCDC96Q2M329 555 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 MFSD14CQ5VZR4 134 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 TTBK2Q6IQ55 1244 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 CYB5R4Q7L1T6 521 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 PNMA1Q8ND90 353 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 CHST13Q8NET6 341 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 NCOA7Q8NI08 942 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 DEFB118Q96PH6 123 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 MMP19Q99542 508 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 UBAC1Q9BSL1 405 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.56□□□□□ -0.56
CD48-202ENST00000368046 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 PAK6Q9NQU5 681 aaPredicted RBP11.56□□□□□ -0.56
CD48-202ENST00000368046 FLRT1Q9NZU1 646 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 FBXO40Q9UH90 709 aa11.56□□□□□ -0.56
CD48-202ENST00000368046 DIS3Q9Y2L1 958 aaKnown RBP11.56□□□□□ -0.56
CD48-202ENST00000368046 MGAMO43451 1857 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 RLFQ13129 1914 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 CDC45O75419 566 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 SLC16A2P36021 539 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 ZNF543Q08ER8 600 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 ZNF792Q3KQV3 632 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 TKFCQ3LXA3 575 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 GPATCH4Q5T3I0 446 aaKnown RBP11.55□□□□□ -0.56
CD48-202ENST00000368046 OLFML2BQ68BL8 750 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
CD48-202ENST00000368046 RALYLQ86SE5 291 aaKnown RBP11.55□□□□□ -0.56
CD48-202ENST00000368046 ENAHQ8N8S7 591 aaPredicted RBP11.55□□□□□ -0.56
CD48-202ENST00000368046 DDX11Q96FC9 970 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 CRISPLD2Q9H0B8 497 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 ANO2Q9NQ90 1003 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 ZNF536O15090 1300 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 TNKSO95271 1327 aa11.55□□□□□ -0.56
CD48-202ENST00000368046 CENPFP49454 3210 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 ERICH2A1L162 156 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 CYP2C19P33261 490 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 SEC23AQ15436 765 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 IFIT1BQ5T764 474 aaKnown RBP11.54□□□□□ -0.56
CD48-202ENST00000368046 SYDE2Q5VT97 1194 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 RASGRP2Q7LDG7 609 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 ANKRD35Q8N283 1001 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 MAML3Q96JK9 1138 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 RANBP17Q9H2T7 1088 aaKnown RBP11.54□□□□□ -0.56
CD48-202ENST00000368046 PNMA2Q9UL42 364 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 TAF6LQ9Y6J9 622 aa11.54□□□□□ -0.56
CD48-202ENST00000368046 FRMPD2Q68DX3 1309 aaPredicted RBP11.54□□□□□ -0.56
CD48-202ENST00000368046 IFIT3O14879 490 aaKnown RBP11.53□□□□□ -0.56
CD48-202ENST00000368046 SLC27A2O14975 620 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 ICAM1P05362 532 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 PGK2P07205 417 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 GOLGA8HP0CJ92 632 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 SNAP25P60880 206 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 SART3Q15020 963 aaKnown RBP11.53□□□□□ -0.56
CD48-202ENST00000368046 CREB3L3Q68CJ9 461 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 CCDC174Q6PII3 467 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 STOX1Q6ZVD7 989 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 IGDCC4Q8TDY8 1250 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 SHISA4Q96DD7 197 aa11.53□□□□□ -0.56
CD48-202ENST00000368046 TRERF1Q96PN7 1200 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms