RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 GNL3LQ9NVN8 582 aaKnown RBP13.11□□□□□ -0.31
USF1-201ENST00000368019 ZNF446Q9NWS9 450 aa13.11□□□□□ -0.31
USF1-201ENST00000368019 DACH1Q9UI36 760 aa13.11□□□□□ -0.31
USF1-201ENST00000368019 DENND2AQ9ULE3 1009 aa13.11□□□□□ -0.31
USF1-201ENST00000368019 FHOD1Q9Y613 1164 aa13.11□□□□□ -0.31
USF1-201ENST00000368019 V9GYY5 206 aaPredicted RBP13.11□□□□□ -0.31
USF1-201ENST00000368019 DOCK3Q8IZD9 2030 aa13.11□□□□□ -0.31
USF1-201ENST00000368019 GAKO14976 1311 aa13.11□□□□□ -0.31
USF1-201ENST00000368019 KLF18A0A0U1RQI7 1052 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 A0A1B0GUL7 405 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 GOLGA8BA8MQT2 603 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 M0R2C6 588 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 PDHXO00330 501 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 CPLX1O14810 134 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 STX10O60499 249 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 UBASH3AP57075 661 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 MAP3K10Q02779 954 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 TBX2Q13207 712 aaPredicted RBP13.1□□□□□ -0.31
USF1-201ENST00000368019 PTPAQ15257 358 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 ERCC6LQ2NKX8 1250 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 REXO1L1PQ8IX06 675 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 GPR161Q8N6U8 529 aaKnown RBP13.1□□□□□ -0.31
USF1-201ENST00000368019 MNS1Q8NEH6 495 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 FAM163AQ96GL9 167 aaPredicted RBP13.1□□□□□ -0.31
USF1-201ENST00000368019 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 TRIM47Q96LD4 638 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 MTA3Q9BTC8 594 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 IDI2Q9BXS1 227 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 HSD3B7Q9H2F3 369 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
USF1-201ENST00000368019 CXCL11O14625 94 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 ENTPD3O75355 529 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
USF1-201ENST00000368019 ADORA1P30542 326 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 DOCK1Q14185 1865 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 CCDC102BQ68D86 513 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 SH3BP5LQ7L8J4 393 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 HOMER1Q86YM7 354 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 SRRDQ9UH36 339 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 TRIOBPQ9H2D6 2365 aa13.09□□□□□ -0.31
USF1-201ENST00000368019 PDS5AQ29RF7 1337 aaKnown RBP13.09□□□□□ -0.31
USF1-201ENST00000368019 POTEB2H3BUK9 544 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 BCRP11274 1271 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 OSBPP22059 807 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 PSMC4P43686 418 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 PLA2G4AP47712 749 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 RCAN1P53805 252 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 ANTXR2P58335 489 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 GUCY1B3Q02153 619 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 SLC4A8Q2Y0W8 1093 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 NT5DC1Q5TFE4 455 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 TMEM139Q8IV31 216 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 OSBP2Q969R2 916 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 NEUROD6Q96NK8 337 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.08□□□□□ -0.324e-8■■■■■ 30.4
USF1-201ENST00000368019 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.08□□□□□ -0.32
USF1-201ENST00000368019 MROH7-TTC4A0A0A0MT08 1334 aa13.08□□□□□ -0.32
USF1-201ENST00000368019 FOXP2O15409 715 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 TIMM10P62072 90 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 MTFR1Q15390 333 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 ALX1Q15699 326 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 MUM1L1Q5H9M0 696 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 TTC39AQ5SRH9 613 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 KANK3Q6NY19 840 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 KRBA2Q6ZNG9 492 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 RSRC2Q7L4I2 434 aaKnown RBP13.07□□□□□ -0.32
USF1-201ENST00000368019 SGMS1Q86VZ5 419 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 SCYL3Q8IZE3 742 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 ZNF579Q8NAF0 562 aaKnown RBP13.07□□□□□ -0.32
USF1-201ENST00000368019 MLKLQ8NB16 471 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 ENOX1Q8TC92 643 aaKnown RBP13.07□□□□□ -0.32
USF1-201ENST00000368019 WASF1Q92558 559 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 RABGGTAQ92696 567 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 MAP3K14Q99558 947 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 NAA15Q9BXJ9 866 aaKnown RBP13.07□□□□□ -0.32
USF1-201ENST00000368019 PSD3Q9NYI0 1048 aa13.07□□□□□ -0.32
USF1-201ENST00000368019 A0A0G2JLL6 359 aaPredicted RBP13.06□□□□□ -0.32
USF1-201ENST00000368019 VWA3AA6NCI4 1184 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 DDTLA6NHG4 134 aaPredicted RBP13.06□□□□□ -0.32
USF1-201ENST00000368019 KIF28PB7ZC32 967 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 TULP2O00295 520 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 SH2B2O14492 632 aaPredicted RBP13.06□□□□□ -0.32
USF1-201ENST00000368019 ZNF213O14771 459 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 SERPINC1P01008 464 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 MYCP01106 439 aaPredicted RBP13.06□□□□□ -0.32
USF1-201ENST00000368019 FGAP02671 866 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 TUBBP07437 444 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 PTPRAP18433 802 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 HOXD10P28358 340 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 FOSBP53539 338 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 TRDNQ13061 729 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 GPS2Q13227 327 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 TTF1Q15361 905 aaPredicted RBP13.06□□□□□ -0.32
USF1-201ENST00000368019 SHC4Q6S5L8 630 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms