RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 FOSP01100 380 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 MYCP01106 439 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 XRCC5P13010 732 aaKnown RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 PDE6BP35913 854 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 PTPN12Q05209 780 aaKnown RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 LRMPQ12912 555 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 PROSER3Q2NL68 480 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 CCDC25Q86WR0 208 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 LSM14BQ9BX40 385 aaKnown RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 ANO3Q9BYT9 981 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 TLR7Q9NYK1 1049 aaKnown RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 PKD2L1Q9P0L9 805 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 RNF14Q9UBS8 474 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 EPN1Q9Y6I3 576 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 TULP4Q9NRJ4 1543 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 USP31Q70CQ4 1352 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 SLFN14P0C7P3 912 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 YWHAEP62258 255 aaKnown RBP9.92□□□□□ -0.82
SYNE1-205ENST00000367251 IRX3P78415 501 aaPredicted RBP9.92□□□□□ -0.82
SYNE1-205ENST00000367251 ATP11AP98196 1134 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 SEPT2Q15019 361 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 DPP8Q6V1X1 898 aaPredicted RBP9.92□□□□□ -0.82
SYNE1-205ENST00000367251 MAPKAPK5Q8IW41 473 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 C10orf67Q8IYJ2 551 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 CHURC1Q8WUH1 139 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 LMTK3Q96Q04 1460 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 CEP152O94986 1710 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 PRPF3O43395 683 aaKnown RBP9.92□□□□□ -0.82
SYNE1-205ENST00000367251 EXOC3O60645 756 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 FAM47AQ5JRC9 791 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 ZNF658Q5TYW1 1059 aaPredicted RBP9.92□□□□□ -0.82
SYNE1-205ENST00000367251 GPATCH11Q8N954 259 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 GRK7Q8WTQ7 553 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 KIFC2Q96AC6 838 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 STK36Q9NRP7 1315 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 GCNT3O95395 438 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 STAT1P42224 750 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 SATB1Q01826 763 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 BIRC3Q13489 604 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 ERCC6LQ2NKX8 1250 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 PANX2Q96RD6 677 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 RIC8AQ9NPQ8 531 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 RWDD2AQ9UIY3 292 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 LEMD3Q9Y2U8 911 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 PCDHA5Q9Y5H7 936 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 LRRC7Q96NW7 1537 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 PXDNLA1KZ92 1463 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 ESYT2A0FGR8 921 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 ZBED4O75132 1171 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 INF2Q27J81 1249 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 PPFIBP2Q8ND30 876 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 CCDC110Q8TBZ0 833 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 FAM184BQ9ULE4 1060 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 SRPRBQ9Y5M8 271 aaKnown RBP9.92□□□□□ -0.82
SYNE1-205ENST00000367251 H7C1W4 665 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 DAPK3O43293 454 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 VIMP08670 466 aaKnown RBP9.92□□□□□ -0.82
SYNE1-205ENST00000367251 ASPRV1Q53RT3 343 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 HACE1Q8IYU2 909 aa9.92□□□□□ -0.82
SYNE1-205ENST00000367251 ERBB3P21860 1342 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 SOS2Q07890 1332 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-205ENST00000367251 WDR17Q8IZU2 1322 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 GIPC1O14908 333 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 GCFC2P16383 781 aaKnown RBP9.91□□□□□ -0.82
SYNE1-205ENST00000367251 PTGDRQ13258 359 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 ARHGAP27Q6ZUM4 889 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 VSTM4Q8IW00 320 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 NSMCE1Q8WV22 266 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 SPTLC3Q9NUV7 552 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 PANK4Q9NVE7 773 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 STK17AQ9UEE5 414 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 CCDC169A6NNP5 214 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-205ENST00000367251 SEMA3FQ13275 785 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 DAAM2Q86T65 1068 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 GPBP1Q86WP2 473 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 THAP9Q9H5L6 903 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 GREM2Q9H772 168 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 SH3GLB2Q9NR46 395 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 KLRF2D3W0D1 207 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 CLIC6Q96NY7 704 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 PSTPIP2Q9H939 334 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 FAM207AQ9NSI2 230 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-205ENST00000367251 AGTPBP1Q9UPW5 1226 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 JAG2Q9Y219 1238 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 CIB2O75838 187 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 SASH1O94885 1247 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 ABL1P00519 1130 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 HPDP32754 393 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-205ENST00000367251 BCAMP50895 628 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 LGSNQ5TDP6 509 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 ARL6IP4Q66PJ3 421 aaKnown RBP9.91□□□□□ -0.82
SYNE1-205ENST00000367251 C11orf57Q6ZUT1 292 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-205ENST00000367251 OTUD6AQ7L8S5 288 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 P3H4Q92791 437 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 TEKT1Q969V4 418 aa9.91□□□□□ -0.82
SYNE1-205ENST00000367251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.91□□□□□ -0.82
SYNE1-205ENST00000367251 ARMCX3Q9UH62 379 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms