RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ITIH6Q6UXX5 1313 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 EBAG9O00559 213 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 CALM1P0DP23 149 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 CALM2P0DP24 149 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 CALM3P0DP25 149 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 IBSPP21815 317 aaPredicted RBP9.15□□□□□ -0.95
CD46-208ENST00000367042 ATP1A2P50993 1020 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 LETM2Q2VYF4 491 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 SH3RF1Q7Z6J0 888 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 COG1Q8WTW3 980 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 HPS3Q969F9 1004 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 ZNF512BQ96KM6 892 aaPredicted RBP9.15□□□□□ -0.95
CD46-208ENST00000367042 MTRQ99707 1265 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 HPCAL4Q9UM19 191 aa9.15□□□□□ -0.95
CD46-208ENST00000367042 REXO2Q9Y3B8 237 aaKnown RBP9.15□□□□□ -0.95
CD46-208ENST00000367042 CDHR2Q9BYE9 1310 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 TACC1O75410 805 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 MYBL2P10244 700 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 CYP2D6P10635 497 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 HERVK_113P62684 666 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 ARID5AQ03989 594 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 TMTC3Q6ZXV5 915 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 TRAPPC11Q7Z392 1133 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 CACNA2D4Q7Z3S7 1137 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 ACSBG1Q96GR2 724 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 PYM1Q9BRP8 204 aaKnown RBP9.14□□□□□ -0.95
CD46-208ENST00000367042 IFIH1Q9BYX4 1025 aaKnown RBP9.14□□□□□ -0.95
CD46-208ENST00000367042 MKNK2Q9HBH9 465 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 TCP11L1Q9NUJ3 509 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 MCM9Q9NXL9 1143 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 EHD2Q9NZN4 543 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 COL5A2P05997 1499 aaPredicted RBP9.14□□□□□ -0.95
CD46-208ENST00000367042 LGALS16A8MUM7 142 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 ADAMTS3O15072 1205 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 BUB1O43683 1085 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 MOCS3O95396 460 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 PLEKP08567 350 aaPredicted RBP9.14□□□□□ -0.95
CD46-208ENST00000367042 PAFAH1B1P43034 410 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 DNM2P50570 870 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 GNGT1P63211 74 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 SEC23AQ15436 765 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 EZH2Q15910 746 aaKnown RBP9.14□□□□□ -0.95
CD46-208ENST00000367042 E2F4Q16254 413 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 CT47A1Q5JQC4 288 aaPredicted RBP9.14□□□□□ -0.95
CD46-208ENST00000367042 BLIDQ8IZY5 108 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 GPATCH11Q8N954 259 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 IPO4Q8TEX9 1081 aaKnown RBP9.14□□□□□ -0.95
CD46-208ENST00000367042 PPM1EQ8WY54 764 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 CNOT6LQ96LI5 555 aaKnown RBP9.14□□□□□ -0.95
CD46-208ENST00000367042 EHD4Q9H223 541 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 MLXIPQ9HAP2 919 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 DISC1Q9NRI5 854 aa9.14□□□□□ -0.95
CD46-208ENST00000367042 NUTM2BA6NNL0 878 aaPredicted RBP9.13□□□□□ -0.95
CD46-208ENST00000367042 NUTM2EB1AL46 878 aaPredicted RBP9.13□□□□□ -0.95
CD46-208ENST00000367042 MARCH6O60337 910 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 PPFIA4O75335 1185 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 SSBP05455 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
CD46-208ENST00000367042 GOLGA8HP0CJ92 632 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 KIF5BP33176 963 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 MAGEA9P43362 315 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 TROAPQ12815 778 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 PPP2R5BQ15173 497 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 PDXDC2PQ6P474 469 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 ANKRD18AQ8IVF6 992 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 UIMC1Q96RL1 719 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 CPVLQ9H3G5 476 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 SLC39A2Q9NP94 309 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 TFCP2L1Q9NZI6 479 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 RCCD1A6NED2 376 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 SYF2O95926 243 aaKnown RBP9.13□□□□□ -0.95
CD46-208ENST00000367042 FGFR2P21802 821 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 AMPD2Q01433 879 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 IL17AQ16552 155 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 PTPROQ16827 1216 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 DYMQ7RTS9 669 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 RRP36Q96EU6 259 aaKnown RBP9.13□□□□□ -0.95
CD46-208ENST00000367042 CDK5RAP3Q96JB5 506 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 FAM170AA1A519 330 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 HSF2BPO75031 334 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 SLC20A2Q08357 652 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 WDR93Q6P2C0 686 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 NFRKBQ6P4R8 1299 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.13□□□□□ -0.95
CD46-208ENST00000367042 PACS2Q86VP3 889 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 HDAC7Q8WUI4 952 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 ALS2CR12Q96Q35 445 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 JRKLQ9Y4A0 524 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 UBR2Q8IWV8 1755 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 PNPLA7Q6ZV29 1317 aa9.13□□□□□ -0.95
CD46-208ENST00000367042 PDE2AO00408 941 aaPredicted RBP9.12□□□□□ -0.95
CD46-208ENST00000367042 PSMD14O00487 310 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 NCK2O43639 380 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 CCNT1O60563 726 aaKnown RBP9.12□□□□□ -0.95
CD46-208ENST00000367042 CYP19A1P11511 503 aaPredicted RBP9.12□□□□□ -0.95
CD46-208ENST00000367042 FCER1AP12319 257 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 CALML3P27482 149 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 LONP1P36776 959 aaKnown RBP9.12□□□□□ -0.95
CD46-208ENST00000367042 MNAT1P51948 309 aa9.12□□□□□ -0.95
CD46-208ENST00000367042 RRAGAQ7L523 313 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 600.6 ms