RNA–Protein interactions for RNA: ENST00000366981.8

ATF3-203, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-203ENST00000366981 SHTN1A0MZ66 631 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 C2orf72A6NCS6 295 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 USP17L5A8MUK1 530 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 KLRF2D3W0D1 207 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 XBP1P17861 261 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 NCLP19338 710 aaKnown RBP8.46□□□□□ -1.06
ATF3-203ENST00000366981 FOSBP53539 338 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 AKAP17AQ02040 695 aaKnown RBP8.46□□□□□ -1.06
ATF3-203ENST00000366981 SNW1Q13573 536 aaKnown RBP8.46□□□□□ -1.06
ATF3-203ENST00000366981 TRIM29Q14134 588 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 NBPF9Q3BBW0 867 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 TMEM259Q4ZIN3 620 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 RILPL1Q5EBL4 403 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 GPATCH4Q5T3I0 446 aaKnown RBP8.46□□□□□ -1.06
ATF3-203ENST00000366981 CCDC183Q5T5S1 534 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 TYW1BQ6NUM6 668 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 LRSAM1Q6UWE0 723 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 MAMSTRQ6ZN01 415 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 GMCL1P1Q8NEA9 526 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 KCNG4Q8TDN1 519 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 SYAP1Q96A49 352 aaPredicted RBP8.46□□□□□ -1.06
ATF3-203ENST00000366981 ZMYND12Q9H0C1 365 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 GINM1Q9NU53 330 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 BARHL2Q9NY43 387 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 VPS54Q9P1Q0 977 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 PCDHA7Q9UN72 937 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 KCNJ14Q9UNX9 436 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 CLIC4Q9Y696 253 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 ZNF541Q9H0D2 1346 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 PTPRFP10586 1907 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 RLFQ13129 1914 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 SMCHD1A6NHR9 2005 aa8.46□□□□□ -1.06
ATF3-203ENST00000366981 SCN4AP35499 1836 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 GLTPD2A6NH11 291 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 STXBP3O00186 592 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 SPTLC2O15270 562 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 LETM1O95202 739 aaPredicted RBP8.45□□□□□ -1.06
ATF3-203ENST00000366981 EGFRP00533 1210 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 EEF2P13639 858 aaKnown RBP8.45□□□□□ -1.06
ATF3-203ENST00000366981 LIG1P18858 919 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 LMNB1P20700 586 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 KRT2P35908 639 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 RFC5P40937 340 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 TRAPPC10P48553 1259 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 GMPSP49915 693 aaPredicted RBP8.45□□□□□ -1.06
ATF3-203ENST00000366981 EIF6P56537 245 aaKnown RBP8.45□□□□□ -1.06
ATF3-203ENST00000366981 NR5A1Q13285 461 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 SAFBQ15424 915 aaKnown RBP eCLIP8.45□□□□□ -1.06
ATF3-203ENST00000366981 SF3A1Q15459 793 aaKnown RBP8.45□□□□□ -1.06
ATF3-203ENST00000366981 ABCB5Q2M3G0 1257 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 EARS2Q5JPH6 523 aaKnown RBP8.45□□□□□ -1.06
ATF3-203ENST00000366981 WWC2Q6AWC2 1192 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 USP17L2Q6R6M4 530 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 BTNL9Q6UXG8 535 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 RASGRP2Q7LDG7 609 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 CLEC10AQ8IUN9 316 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 DCAF4Q8WV16 495 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 GMCL1Q96IK5 515 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 CSRNP1Q96S65 589 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 PHOX2BQ99453 314 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 DDX19AQ9NUU7 478 aaKnown RBP8.45□□□□□ -1.06
ATF3-203ENST00000366981 CLIP2Q9UDT6 1046 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 HPSEQ9Y251 543 aa8.45□□□□□ -1.06
ATF3-203ENST00000366981 OTOFQ9HC10 1997 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 CLRN2A0PK11 232 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 FAM196BA6NMK8 535 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 PHF20L1A8MW92 1017 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 TCP10L2B9ZVM9 353 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 ADAMTS3O15072 1205 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 MYO1BO43795 1136 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 PLA2G6O60733 806 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 PTPREP23469 700 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 CALML3P27482 149 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 TIE1P35590 1138 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 DEKP35659 375 aaKnown RBP8.44□□□□□ -1.06
ATF3-203ENST00000366981 KCNA1Q09470 495 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 TNFAIP1Q13829 316 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 SEPT2Q15019 361 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 SHROOM1Q2M3G4 852 aaPredicted RBP8.44□□□□□ -1.06
ATF3-203ENST00000366981 PPP1R18Q6NYC8 613 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 CDAN1Q8IWY9 1227 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 ELOA2Q8IYF1 753 aaPredicted RBP8.44□□□□□ -1.06
ATF3-203ENST00000366981 GPC2Q8N158 579 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 CCDC148Q8NFR7 591 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 TMEM121BQ9BXQ6 578 aaPredicted RBP8.44□□□□□ -1.06
ATF3-203ENST00000366981 GOLPH3LQ9H4A5 285 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 JMJD4Q9H9V9 463 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 NPDC1Q9NQX5 325 aaPredicted RBP8.44□□□□□ -1.06
ATF3-203ENST00000366981 WBP1LQ9NX94 342 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 CNOT7Q9UIV1 285 aaKnown RBP8.44□□□□□ -1.06
ATF3-203ENST00000366981 PCDHA4Q9UN74 947 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 TRPC6Q9Y210 931 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 PDE4DIPQ5VU43 2346 aa8.44□□□□□ -1.06
ATF3-203ENST00000366981 hCG_1642624A0A1W2PR95 340 aa8.43□□□□□ -1.06
ATF3-203ENST00000366981 A0A1W2PRG0 241 aa8.43□□□□□ -1.06
ATF3-203ENST00000366981 POTECB2RU33 542 aa8.43□□□□□ -1.06
ATF3-203ENST00000366981 CUTAO60888 179 aa8.43□□□□□ -1.06
ATF3-203ENST00000366981 GOLGA8HP0CJ92 632 aa8.43□□□□□ -1.06
ATF3-203ENST00000366981 CMA1P23946 247 aa8.43□□□□□ -1.06
ATF3-203ENST00000366981 CAP2P40123 477 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms