RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 BRMS1Q9HCU9 246 aa15.82■□□□□ 0.12
CSNK1E-201ENST00000359867 CABP5Q9NP86 173 aa15.82■□□□□ 0.12
CSNK1E-201ENST00000359867 ATAD5Q96QE3 1844 aa15.82■□□□□ 0.12
CSNK1E-201ENST00000359867 MYH4Q9Y623 1939 aa15.82■□□□□ 0.12
CSNK1E-201ENST00000359867 FAM237AA0A1B0GTK4 181 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 A0A1B0GVL5 298 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 RIOK3O14730 519 aaKnown RBP15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 EEF2P13639 858 aaKnown RBP15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 CDK11BP21127 795 aaKnown RBP15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 KRT2P35908 639 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 NDUFA8P51970 172 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 ICA1Q05084 483 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 LRMPQ12912 555 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 ANO6Q4KMQ2 910 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 MOB2Q70IA6 237 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 ZNF341Q9BYN7 854 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 NRBP1Q9UHY1 535 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 TAOK2Q9UL54 1235 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 CEP131Q9UPN4 1083 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 TOB1P50616 345 aaPredicted RBP15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 SIAH1Q8IUQ4 282 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 DRC7Q8IY82 874 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 TIGD1Q96MW7 591 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 ZNF408Q9H9D4 720 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 TTLL1O95922 423 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 SCG2P13521 617 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 MARCKSP29966 332 aaPredicted RBP15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 PFKFB3Q16875 520 aaPredicted RBP15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 LZTS2Q9BRK4 669 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 KANSL2Q9H9L4 492 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 VPS54Q9P1Q0 977 aa15.81■□□□□ 0.12
CSNK1E-201ENST00000359867 NR5A1Q13285 461 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 LDHDQ86WU2 507 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 KLRG1Q96E93 195 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 HOOK2Q96ED9 719 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 SH3GLB2Q9NR46 395 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 RAD21O60216 631 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 USP2O75604 605 aaPredicted RBP15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 ZNF202O95125 648 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 ECE1P42892 770 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 NOVP48745 357 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 IRX5P78411 483 aaPredicted RBP15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 CCDC186Q7Z3E2 898 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 FAM177A1Q8N128 213 aaPredicted RBP15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 KRI1Q8N9T8 703 aaKnown RBP15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 SHISA4Q96DD7 197 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 SDF4Q9BRK5 362 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 CBX8Q9HC52 389 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 HPSEQ9Y251 543 aa15.8■□□□□ 0.12
CSNK1E-201ENST00000359867 A0A1W2PRG0 241 aa15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 TOP1P11387 765 aaKnown RBP15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 PFKFB1P16118 471 aa15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 GTF2F1P35269 517 aaKnown RBP eCLIP15.79■□□□□ 0.122e-9■■■■■ 41.8
CSNK1E-201ENST00000359867 STX1AQ16623 288 aa15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 RESP18Q5W5W9 173 aa15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 ACER1Q8TDN7 264 aa15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 OXER1Q8TDS5 423 aa15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 GPBP1L1Q9HC44 474 aaPredicted RBP15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 CTNND1O60716 968 aaKnown RBP15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 ASNSP08243 561 aa15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 MAD2L2Q9UI95 211 aa15.79■□□□□ 0.12
CSNK1E-201ENST00000359867 GOLGA6L6A8MZA4 724 aa15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 BMP15O95972 392 aa15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 TTLL12Q14166 644 aaPredicted RBP15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 ZYXQ15942 572 aaKnown RBP15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 ZNF112Q9UJU3 913 aa15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 PALM3A6NDB9 673 aaPredicted RBP15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 GOLGA8HP0CJ92 632 aa15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 PTPREP23469 700 aa15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 SHC4Q6S5L8 630 aa15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.78■□□□□ 0.122e-7■■□□□ 13.4
CSNK1E-201ENST00000359867 SECISBP2LQ93073 1101 aaKnown RBP15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 TRIM5Q9C035 493 aa15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 ANO10Q9NW15 660 aa15.78■□□□□ 0.12
CSNK1E-201ENST00000359867 DOCK1Q14185 1865 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 OTOFQ9HC10 1997 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 hCG_1642624A0A1W2PR95 340 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 PPP1R12BO60237 982 aaPredicted RBP15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 CALML3P27482 149 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 SMARCA1P28370 1054 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 NF2P35240 595 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 SYKP43405 635 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 ZNF165P49910 485 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 NPY5RQ15761 445 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 STAG2Q8N3U4 1231 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 TNFRSF25Q93038 417 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 C16orf45Q96MC5 204 aaPredicted RBP15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 DNAJC25Q9H1X3 360 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 NYAP2Q9P242 653 aa15.77■□□□□ 0.12
CSNK1E-201ENST00000359867 BAZ2BQ9UIF8 2168 aaKnown RBP15.77■□□□□ 0.11
CSNK1E-201ENST00000359867 USP17L5A8MUK1 530 aa15.77■□□□□ 0.11
CSNK1E-201ENST00000359867 USP17L2Q6R6M4 530 aa15.77■□□□□ 0.11
CSNK1E-201ENST00000359867 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.77■□□□□ 0.11
CSNK1E-201ENST00000359867 ELOA2Q8IYF1 753 aaPredicted RBP15.77■□□□□ 0.11
CSNK1E-201ENST00000359867 SCYL3Q8IZE3 742 aa15.77■□□□□ 0.11
CSNK1E-201ENST00000359867 KIAA1468Q9P260 1216 aa15.77■□□□□ 0.11
CSNK1E-201ENST00000359867 TRIM75PA6NK02 468 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 NLRP5P59047 1200 aa15.76■□□□□ 0.11
CSNK1E-201ENST00000359867 VGLL4Q14135 290 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms