RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 MAPK8IP2Q13387 824 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PTPRTO14522 1441 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 KCNJ18B7U540 433 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 KRIT1O00522 736 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 SLC27A2O14975 620 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 SMARCA5O60264 1052 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 TNFAIP3P21580 790 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PCYT1AP49585 367 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PRDM15P57071 1507 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 KCNJ12Q14500 433 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 SLC39A14Q15043 492 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 PARP10Q53GL7 1025 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 KCTD17Q8N5Z5 321 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 EDEM3Q9BZQ6 932 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 C19orf44Q9H6X5 657 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ATP7BP35670 1465 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ZBED6P86452 979 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ATP2B2Q01814 1243 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ESCO1Q5FWF5 840 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 TEX11Q8IYF3 940 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 GPR108Q9NPR9 543 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ARMCX3Q9UH62 379 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 IPO11Q9UI26 975 aaKnown RBP7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ADAM21Q9UKJ8 722 aa7.19□□□□□ -1.26
VPS13B-202ENST00000357162 ATP10DQ9P241 1426 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 GFPT2O94808 682 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 VSTM4Q8IW00 320 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 NEK9Q8TD19 979 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 CACNA1HO95180 2353 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 TBC1D22AQ8WUA7 517 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 ABCF2Q9UG63 623 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 ZNF521Q96K83 1311 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 MINDY4BA8MYZ0 360 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 MORC3Q14149 939 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 ISM2Q6H9L7 571 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 TTC39CQ8N584 583 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 HNRNPLLQ8WVV9 542 aaKnown RBP7.18□□□□□ -1.26
VPS13B-202ENST00000357162 C10orf88Q9H8K7 445 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 UBN2Q6ZU65 1347 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 RSPH10B2B2RC85 870 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 RSPH10BP0C881 870 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 MAGEA1P43355 309 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 PDXDC1Q6P996 788 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 CDKL2Q92772 493 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 CCDC93Q567U6 631 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 TTC38Q5R3I4 469 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 DCAF5Q96JK2 942 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 ALDH8A1Q9H2A2 487 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-202ENST00000357162 CTIFO43310 598 aaKnown RBP7.18□□□□□ -1.26
VPS13B-202ENST00000357162 SSH3Q8TE77 659 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 CLTAP09496 248 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 RIPPLY1Q0D2K3 151 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 MAP7D3Q8IWC1 876 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 NYXQ9GZU5 481 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 ZMYM6O95789 1325 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 ATP2C2O75185 946 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 AFMP43652 599 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 IGBP1P78318 339 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 NELFBQ8WX92 580 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 ATG3Q9NT62 314 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 A2ML1A8K2U0 1454 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 PTCH1Q13635 1447 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 CHGBP05060 677 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 KRT15P19012 456 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 ABCF3Q9NUQ8 709 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 CTNND2Q9UQB3 1225 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 POLR2BP30876 1174 aaKnown RBP7.18□□□□□ -1.26
VPS13B-202ENST00000357162 EXOC8Q8IYI6 725 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 FMO2Q99518 471 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 THAP9Q9H5L6 903 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 FAM8A1Q9UBU6 413 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 IFT88Q13099 833 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 CAPRIN2Q6IMN6 1127 aaKnown RBP7.18□□□□□ -1.26
VPS13B-202ENST00000357162 LRRC8BQ6P9F7 803 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 LDHAL6AQ6ZMR3 332 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 DZIP3Q86Y13 1208 aaKnown RBP7.18□□□□□ -1.26
VPS13B-202ENST00000357162 LRRC8CQ8TDW0 803 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 SPDL1Q96EA4 605 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 SIRT1Q96EB6 747 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 PPP1R13BQ96KQ4 1090 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 CSRNP1Q96S65 589 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 DDX21Q9NR30 783 aaKnown RBP eCLIP7.18□□□□□ -1.262e-21■■■■■ 83.8
VPS13B-202ENST00000357162 RCOR1Q9UKL0 485 aa7.18□□□□□ -1.26
VPS13B-202ENST00000357162 MROH5Q6ZUA9 1318 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 ATP10AO60312 1499 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 PARP1P09874 1014 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 HARSP12081 509 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 FKBP3Q00688 224 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 SLC9C2Q5TAH2 1124 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 TMTC3Q6ZXV5 915 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 ENAHQ8N8S7 591 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 BAG5Q9UL15 447 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 ATG16L1Q676U5 607 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 UPF3AQ9H1J1 476 aaKnown RBP7.17□□□□□ -1.26
VPS13B-202ENST00000357162 SLITRK6Q9H5Y7 841 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 KCNA4P22459 653 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 HSPA13P48723 471 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 KRT12Q99456 494 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 CUL4BQ13620 913 aa7.17□□□□□ -1.26
VPS13B-202ENST00000357162 KPNB1Q14974 876 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms