RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 DPF2Q92785 391 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 SMARCE1Q969G3 411 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 XPO4Q9C0E2 1151 aaKnown RBP20.03■□□□□ 0.8
NPAS3-202ENST00000356141 FANCLQ9NW38 375 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 HMGB2P26583 209 aaKnown RBP20.03■□□□□ 0.8
NPAS3-202ENST00000356141 ATP2C1P98194 919 aaPredicted RBP20.03■□□□□ 0.8
NPAS3-202ENST00000356141 ABCB5Q2M3G0 1257 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 CCDC178Q5BJE1 867 aa20.03■□□□□ 0.8
NPAS3-202ENST00000356141 TMED8Q6PL24 325 aaPredicted RBP20.03■□□□□ 0.8
NPAS3-202ENST00000356141 TDP2O95551 362 aa20.02■□□□□ 0.8
NPAS3-202ENST00000356141 TECP42680 631 aa20.02■□□□□ 0.8
NPAS3-202ENST00000356141 TXKP42681 527 aa20.02■□□□□ 0.8
NPAS3-202ENST00000356141 ZNF543Q08ER8 600 aa20.02■□□□□ 0.8
NPAS3-202ENST00000356141 RSBN1LQ6PCB5 846 aaPredicted RBP20.02■□□□□ 0.8
NPAS3-202ENST00000356141 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
NPAS3-202ENST00000356141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.02■□□□□ 0.8
NPAS3-202ENST00000356141 R3HCC1Q9Y3T6 440 aaKnown RBP20.02■□□□□ 0.8
NPAS3-202ENST00000356141 MDM2Q00987 491 aaPredicted RBP20.02■□□□□ 0.79
NPAS3-202ENST00000356141 SLFN13Q68D06 897 aa20.02■□□□□ 0.79
NPAS3-202ENST00000356141 PLA2G4DQ86XP0 818 aa20.02■□□□□ 0.79
NPAS3-202ENST00000356141 SIAH1Q8IUQ4 282 aa20.02■□□□□ 0.79
NPAS3-202ENST00000356141 CCDC148Q8NFR7 591 aa20.02■□□□□ 0.79
NPAS3-202ENST00000356141 ACER1Q8TDN7 264 aa20.02■□□□□ 0.79
NPAS3-202ENST00000356141 SPZ1Q9BXG8 430 aa20.01■□□□□ 0.79
NPAS3-202ENST00000356141 PRDM10Q9NQV6 1147 aa20.01■□□□□ 0.79
NPAS3-202ENST00000356141 SERPINA10Q9UK55 444 aa20.01■□□□□ 0.79
NPAS3-202ENST00000356141 A0A1W2PRG0 241 aa20.01■□□□□ 0.79
NPAS3-202ENST00000356141 CXCL9Q07325 125 aa20.01■□□□□ 0.79
NPAS3-202ENST00000356141 CUL4BQ13620 913 aa20.01■□□□□ 0.79
NPAS3-202ENST00000356141 NIM1KQ8IY84 436 aa20.01■□□□□ 0.79
NPAS3-202ENST00000356141 PAGE5Q96GU1 130 aa20.01■□□□□ 0.79
NPAS3-202ENST00000356141 C6orf50Q9HD87 102 aa20.01■□□□□ 0.79
NPAS3-202ENST00000356141 NCAPHQ15003 741 aa20■□□□□ 0.79
NPAS3-202ENST00000356141 REXO1Q8N1G1 1221 aaKnown RBP20■□□□□ 0.79
NPAS3-202ENST00000356141 GLIS2Q9BZE0 524 aaPredicted RBP20■□□□□ 0.79
NPAS3-202ENST00000356141 SWAP70Q9UH65 585 aa20■□□□□ 0.79
NPAS3-202ENST00000356141 IGKV6D-41A0A0C4DH26 115 aa20■□□□□ 0.79
NPAS3-202ENST00000356141 SLC30A10Q6XR72 485 aa20■□□□□ 0.79
NPAS3-202ENST00000356141 TMC6Q7Z403 805 aa20■□□□□ 0.79
NPAS3-202ENST00000356141 CACTINQ8WUQ7 758 aaKnown RBP20■□□□□ 0.79
NPAS3-202ENST00000356141 SPDYE2BA6NHP3 402 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 TMEM232C9JQI7 657 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 SERPINC1P01008 464 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 SPDYE6P0CI01 402 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 CC2D2BQ6DHV5 1058 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 PDCL3Q9H2J4 239 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 PIM2Q9P1W9 311 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 ZNF70Q9UC06 446 aaPredicted RBP19.99■□□□□ 0.79
NPAS3-202ENST00000356141 TUBE1Q9UJT0 475 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 MYH8P13535 1937 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 F5H6K3 240 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 M0R2N6 131 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 KLRC3Q07444 240 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 NONOQ15233 471 aaKnown RBP eCLIP19.99■□□□□ 0.79
NPAS3-202ENST00000356141 DTHD1Q6ZMT9 781 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 SAMD7Q7Z3H4 446 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 MTRQ99707 1265 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 TMOD2Q9NZR1 351 aa19.99■□□□□ 0.79
NPAS3-202ENST00000356141 SLC37A4O43826 429 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 CD44P16070 742 aaKnown RBP19.98■□□□□ 0.79
NPAS3-202ENST00000356141 KIAA1755Q5JYT7 1200 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 C4orf32Q8N8J7 132 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 LRRC15Q8TF66 581 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 TIGD1Q96MW7 591 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 ZMYND12Q9H0C1 365 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 SAMSN1Q9NSI8 373 aaKnown RBP19.98■□□□□ 0.79
NPAS3-202ENST00000356141 RTKN2Q8IZC4 609 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 SUPT20HQ8NEM7 779 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 ADCY7P51828 1080 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 QRICH1Q2TAL8 776 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 TBC1D10BQ4KMP7 808 aaPredicted RBP19.98■□□□□ 0.79
NPAS3-202ENST00000356141 UPF1Q92900 1129 aaKnown RBP eCLIP19.98■□□□□ 0.79
NPAS3-202ENST00000356141 IDI2Q9BXS1 227 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 HSD3B7Q9H2F3 369 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 RIOX1Q9H6W3 641 aa19.98■□□□□ 0.79
NPAS3-202ENST00000356141 HOXA13P31271 388 aaPredicted RBP19.97■□□□□ 0.79
NPAS3-202ENST00000356141 STAT6P42226 847 aa19.97■□□□□ 0.79
NPAS3-202ENST00000356141 NLGN2Q8NFZ4 835 aa19.97■□□□□ 0.79
NPAS3-202ENST00000356141 POTEMA6NI47 508 aa19.97■□□□□ 0.79
NPAS3-202ENST00000356141 NDUFB10O96000 172 aa19.97■□□□□ 0.79
NPAS3-202ENST00000356141 ASPRV1Q53RT3 343 aa19.97■□□□□ 0.79
NPAS3-202ENST00000356141 DALRD3Q5D0E6 543 aaKnown RBP19.97■□□□□ 0.79
NPAS3-202ENST00000356141 HPS3Q969F9 1004 aa19.97■□□□□ 0.79
NPAS3-202ENST00000356141 FERMT2Q96AC1 680 aa19.97■□□□□ 0.79
NPAS3-202ENST00000356141 UBXN2AP68543 259 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 CCDC174Q6PII3 467 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 MED15Q96RN5 788 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 DHX36Q9H2U1 1008 aaKnown RBP19.96■□□□□ 0.79
NPAS3-202ENST00000356141 NFE2L3Q9Y4A8 694 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 PCDHA1Q9Y5I3 950 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 C10orf71Q711Q0 1435 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 NEMFO60524 1076 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 UBA7P41226 1012 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 FANCCQ00597 558 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 CDC37Q16543 378 aaPredicted RBP19.96■□□□□ 0.79
NPAS3-202ENST00000356141 NEK8Q86SG6 692 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 GDAQ9Y2T3 454 aa19.96■□□□□ 0.79
NPAS3-202ENST00000356141 FAM237AA0A1B0GTK4 181 aa19.95■□□□□ 0.78
NPAS3-202ENST00000356141 GOLGA6L6A8MZA4 724 aa19.95■□□□□ 0.78
NPAS3-202ENST00000356141 SLFN14P0C7P3 912 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms