RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CCDC96Q2M329 555 aa19.75■□□□□ 0.75
PDLIM7-201ENST00000355572 MFSD6Q6ZSS7 791 aa19.75■□□□□ 0.75
PDLIM7-201ENST00000355572 FAM160B2Q86V87 743 aa19.75■□□□□ 0.75
PDLIM7-201ENST00000355572 PURBQ96QR8 312 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-201ENST00000355572 CPVLQ9H3G5 476 aa19.75■□□□□ 0.75
PDLIM7-201ENST00000355572 SLC5A4Q9NY91 659 aa19.75■□□□□ 0.75
PDLIM7-201ENST00000355572 B4E1Z4 1266 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 MSCO60682 206 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 PDHBP11177 359 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 TOP1P11387 765 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 PTGS1P23219 599 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 OAZ1P54368 228 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 PTH1RQ03431 593 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 IKQ13123 557 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 LRRC41Q15345 812 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 GDF15Q99988 308 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 DSCC1Q9BVC3 393 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 A1CFQ9NQ94 594 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 RNF146Q9NTX7 359 aa19.74■□□□□ 0.75
PDLIM7-201ENST00000355572 SOWAHBA6NEL2 793 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 DNM1LO00429 736 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 KDM4AO75164 1064 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 PGK1P00558 417 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 CHMLP26374 656 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 MAMDC4Q6UXC1 1216 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 BTNL9Q6UXG8 535 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 CHST13Q8NET6 341 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 CHURC1Q8WUH1 139 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 DCAF4Q8WV16 495 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 DDX11Q96FC9 970 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 KATNBL1Q9H079 304 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 RANBP17Q9H2T7 1088 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 DNAH12Q6ZR08 3092 aa19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 RANBP2P49792 3224 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-201ENST00000355572 MYADML2A6NDP7 307 aa19.72■□□□□ 0.75
PDLIM7-201ENST00000355572 SOX1O00570 391 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-201ENST00000355572 ZNF213O14771 459 aa19.72■□□□□ 0.75
PDLIM7-201ENST00000355572 MYCNP04198 464 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-201ENST00000355572 SNHG28P0DPA3 235 aa19.72■□□□□ 0.75
PDLIM7-201ENST00000355572 ALAS1P13196 640 aa19.72■□□□□ 0.75
PDLIM7-201ENST00000355572 FAM133AQ8N9E0 248 aa19.72■□□□□ 0.75
PDLIM7-201ENST00000355572 FERMT2Q96AC1 680 aa19.72■□□□□ 0.75
PDLIM7-201ENST00000355572 CTDP1Q9Y5B0 961 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-201ENST00000355572 ADAMTS4O75173 837 aa19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 GOLGA8HP0CJ92 632 aa19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 MAGEA10P43363 369 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 MFAP1P55081 439 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 TMEM63BQ5T3F8 832 aa19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 SYDE2Q5VT97 1194 aa19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 ANKRD35Q8N283 1001 aa19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 TRERF1Q96PN7 1200 aa19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 ACAD9Q9H845 621 aa19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 SYNGAP1Q96PV0 1343 aa19.71■□□□□ 0.75
PDLIM7-201ENST00000355572 HIP1O00291 1037 aa19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 ADCYAP1R1P41586 468 aa19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 ZNF543Q08ER8 600 aa19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 PPP4R3BQ5MIZ7 849 aa19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 CYB5R4Q7L1T6 521 aa19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 ARMCX2Q7L311 632 aa19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 CCDC144CPQ8IYA2 1237 aa19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 XPNPEP3Q9NQH7 507 aa19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 ZSWIM5Q9P217 1185 aa19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 ZHX1Q9UKY1 873 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-201ENST00000355572 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 NFIBO00712 420 aa19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 FDX1P10109 184 aa19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 RTP1P59025 263 aa19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 COL9A3Q14050 684 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 SLC39A5Q6ZMH5 540 aa19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 ZNF467Q7Z7K2 595 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 ENAHQ8N8S7 591 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 ESR2Q92731 530 aa19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 RNF41Q9H4P4 317 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 FBXO40Q9UH90 709 aa19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 NRBP1Q9UHY1 535 aa19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 CCPG1Q9ULG6 757 aa19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 SYNRGQ9UMZ2 1314 aa19.69■□□□□ 0.74
PDLIM7-201ENST00000355572 SZT2Q5T011 3432 aa19.68■□□□□ 0.74
PDLIM7-201ENST00000355572 ICAM1P05362 532 aa19.68■□□□□ 0.74
PDLIM7-201ENST00000355572 PCP11498 1178 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-201ENST00000355572 STOX1Q6ZVD7 989 aa19.68■□□□□ 0.74
PDLIM7-201ENST00000355572 ARRDC4Q8NCT1 418 aa19.68■□□□□ 0.74
PDLIM7-201ENST00000355572 TTC14Q96N46 770 aa19.68■□□□□ 0.74
PDLIM7-201ENST00000355572 UBA5Q9GZZ9 404 aa19.68■□□□□ 0.74
PDLIM7-201ENST00000355572 CYP39A1Q9NYL5 469 aa19.68■□□□□ 0.74
PDLIM7-201ENST00000355572 KBTBD13C9JR72 458 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 POTEB2H3BUK9 544 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 CTAGE5O15320 804 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 CYP21A2P08686 494 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 RARBP10826 455 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 AKR1A1P14550 325 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 ACVR2BQ13705 512 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 SNX17Q15036 470 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 TRIM60Q495X7 471 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 CCSAPQ6IQ19 270 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 SH3RF1Q7Z6J0 888 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 MSL3Q8N5Y2 521 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 CLEC4DQ8WXI8 215 aa19.67■□□□□ 0.74
PDLIM7-201ENST00000355572 ANKS1AQ92625 1134 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms