RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CPLX4Q7Z7G2 160 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 XAGE2Q96GT9 111 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 AGPAT5Q9NUQ2 364 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 MTIF2P46199 727 aaKnown RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 CCDC57Q2TAC2 916 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 PNMA8AQ86V59 439 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 FBXL16Q8N461 479 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 MB21D1Q8N884 522 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 TMEM87BQ96K49 555 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 PLIN2Q99541 437 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 IFIH1Q9BYX4 1025 aaKnown RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 CPDO75976 1380 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 C21orf2O43822 256 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 HEXIM1O94992 359 aaKnown RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 MDH1P40925 334 aaKnown RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 CARSP49589 748 aaKnown RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 SCARF1Q14162 830 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 PPP1R7Q15435 360 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 ZNF790Q6PG37 636 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 ATG9AQ7Z3C6 839 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 CCDC50Q8IVM0 306 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 ELOA2Q8IYF1 753 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 TRIM58Q8NG06 486 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 IP6K1Q92551 441 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 THOC1Q96FV9 657 aaKnown RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 NAPBQ9H115 298 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 STRN4Q9NRL3 753 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 SNX12Q9UMY4 172 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 ZSCAN5CA6NGD5 496 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 BUB1O43683 1085 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 PRDM1O75626 825 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 FMNL1O95466 1100 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 ZNF579Q8NAF0 562 aaKnown RBP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 RWDD2AQ9UIY3 292 aa8.49□□□□□ -1.05
BRCA1-201ENST00000352993 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRCA1-201ENST00000352993 ANO9A1A5B4 782 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 NUTM2BA6NNL0 878 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 NUTM2EB1AL46 878 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 FAM153BP0C7A2 387 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 KLK7P49862 253 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 PAK2Q13177 524 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 CRYMQ14894 314 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 WTAPQ15007 396 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 NTRK3Q16288 839 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 FAM153CQ494X1 144 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 HIBCHQ6NVY1 386 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 FNBP4Q8N3X1 1017 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 MMGT1Q8N4V1 131 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 ARFGAP2Q8N6H7 521 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 CYFIP2Q96F07 1278 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 ZNF496Q96IT1 587 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 MS4A14Q96JA4 679 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 OSBPL9Q96SU4 736 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 FOXP1Q9H334 677 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 FAM153AQ9UHL3 310 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 TPX2Q9ULW0 747 aaKnown RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 HYOU1Q9Y4L1 999 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 PHRF1Q9P1Y6 1649 aaKnown RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 TMCO5BA8MYB1 307 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 OPLAHO14841 1288 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 CLTAP09496 248 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 ERCC3P19447 782 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 SLC8A1P32418 973 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 KDM7AQ6ZMT4 941 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 C2CD5Q86YS7 1000 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 CACNA2D3Q8IZS8 1091 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 FUKQ8N0W3 1084 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 TCP11Q8WWU5 503 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 SPDL1Q96EA4 605 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 ACTR5Q9H9F9 607 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 RBM12Q9NTZ6 932 aaKnown RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 EID1Q9Y6B2 187 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 CAPN6Q9Y6Q1 641 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 N4BP2Q86UW6 1770 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 FOXP2O15409 715 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 DEXIO95424 95 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 FAM107AO95990 144 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 TMOD1P28289 359 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 PRCPP42785 496 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 MYO1EQ12965 1108 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 ENOX2Q16206 610 aaKnown RBP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 WDR59Q6PJI9 974 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 CREG2Q8IUH2 290 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 KLHL7Q8IXQ5 586 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 MICAL1Q8TDZ2 1067 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 SGSM3Q96HU1 749 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 AATFQ9NY61 560 aaKnown RBP eCLIP8.48□□□□□ -1.05
BRCA1-201ENST00000352993 ZSWIM5Q9P217 1185 aa8.48□□□□□ -1.05
BRCA1-201ENST00000352993 RASSF9O75901 435 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 TCP1P17987 556 aaKnown RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 MCM7P33993 719 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 RABL6Q3YEC7 729 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 HAUS3Q68CZ6 603 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 ATP6V1G3Q96LB4 118 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 KRT12Q99456 494 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 TSGA10Q9BZW7 698 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 LY9Q9HBG7 655 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 PLAAQ9Y263 795 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms