RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 CD151P48509 253 aa11.78□□□□□ -0.52
PKP1-202ENST00000352845 VAV2P52735 878 aa11.78□□□□□ -0.52
PKP1-202ENST00000352845 ITGB3BPQ13352 177 aaPredicted RBP11.78□□□□□ -0.52
PKP1-202ENST00000352845 SEPT2Q15019 361 aa11.78□□□□□ -0.52
PKP1-202ENST00000352845 GKAP1Q5VSY0 366 aaPredicted RBP11.78□□□□□ -0.52
PKP1-202ENST00000352845 HIBCHQ6NVY1 386 aaPredicted RBP11.78□□□□□ -0.52
PKP1-202ENST00000352845 TSEN2Q8NCE0 465 aaKnown RBP11.78□□□□□ -0.52
PKP1-202ENST00000352845 DSCC1Q9BVC3 393 aa11.78□□□□□ -0.52
PKP1-202ENST00000352845 ANKIB1Q9P2G1 1089 aa11.78□□□□□ -0.52
PKP1-202ENST00000352845 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
PKP1-202ENST00000352845 GUCA1BQ9UMX6 200 aa11.78□□□□□ -0.52
PKP1-202ENST00000352845 OPLAHO14841 1288 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 RNF8O76064 485 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 NPTXRO95502 500 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 GYPCP04921 128 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 VIMP08670 466 aaKnown RBP11.77□□□□□ -0.53
PKP1-202ENST00000352845 PYGBP11216 843 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 BMP6P22004 513 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 KIF5BP33176 963 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 RANBP1P43487 201 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 ERVK-24P63145 666 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 KRT83P78385 493 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 LMNB2Q03252 620 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 FMR1Q06787 632 aaKnown RBP eCLIP11.77□□□□□ -0.53
PKP1-202ENST00000352845 MORC3Q14149 939 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 ZNF268Q14587 947 aaPredicted RBP11.77□□□□□ -0.53
PKP1-202ENST00000352845 RABL6Q3YEC7 729 aaPredicted RBP11.77□□□□□ -0.53
PKP1-202ENST00000352845 SPATA1Q5VX52 437 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 CCDC63Q8NA47 563 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 CPLX3Q8WVH0 158 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 RBM41Q96IZ5 413 aaKnown RBP11.77□□□□□ -0.53
PKP1-202ENST00000352845 BLOC1S6Q9UL45 172 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 IQSEC3Q9UPP2 1182 aaPredicted RBP11.77□□□□□ -0.53
PKP1-202ENST00000352845 LEMD3Q9Y2U8 911 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 TNS3Q68CZ2 1445 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 NWD2Q9ULI1 1742 aa11.77□□□□□ -0.53
PKP1-202ENST00000352845 LRRD1A4D1F6 860 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 KIF28PB7ZC32 967 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 KRT86O43790 486 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 NDUFA10O95299 355 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 PAEPP09466 180 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 CDC27P30260 824 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 CTCFP49711 727 aaPredicted RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 SFSWAPQ12872 951 aaKnown RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 PPP1R7Q15435 360 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 IFI16Q16666 785 aaKnown RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 AMOTQ4VCS5 1084 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 KCTD16Q68DU8 428 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 BRINP3Q76B58 766 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 APTXQ7Z2E3 356 aaKnown RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 ATL2Q8NHH9 583 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 MYD88Q99836 296 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 STIM2Q9P246 746 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 EPN1Q9Y6I3 576 aaPredicted RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 CAMTA1Q9Y6Y1 1673 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 TEX33O43247 280 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 ABL1P00519 1130 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 POLR3DP05423 398 aaPredicted RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 HSPD1P10809 573 aaKnown RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 PRLRP16471 622 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 SARSP49591 514 aaKnown RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 ZMYM1Q5SVZ6 1142 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 SHC4Q6S5L8 630 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 LRP10Q7Z4F1 713 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 FOXP4Q8IVH2 680 aaPredicted RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 FBXL16Q8N461 479 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 CAPZA3Q96KX2 299 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 SLF1Q9BQI6 1058 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 METTL22Q9BUU2 404 aaPredicted RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 HELLSQ9NRZ9 838 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 SAMSN1Q9NSI8 373 aaKnown RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 GJB4Q9NTQ9 266 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 HDAC6Q9UBN7 1215 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
PKP1-202ENST00000352845 DDX60Q8IY21 1712 aaKnown RBP11.76□□□□□ -0.53
PKP1-202ENST00000352845 ZNF233A6NK53 670 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 ENC1O14682 589 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
PKP1-202ENST00000352845 MRPS35P82673 323 aaKnown RBP11.75□□□□□ -0.53
PKP1-202ENST00000352845 PAK2Q13177 524 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 LBRQ14739 615 aaKnown RBP11.75□□□□□ -0.53
PKP1-202ENST00000352845 POSTNQ15063 836 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 CCDC96Q2M329 555 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 HSP90AA4PQ58FG1 418 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 KANK3Q6NY19 840 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 LRIG3Q6UXM1 1119 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 MAATS1Q7Z4T9 603 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.75□□□□□ -0.53
PKP1-202ENST00000352845 KCNH3Q9ULD8 1083 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 SLC12A4Q9UP95 1085 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 IFIT3O14879 490 aaKnown RBP11.75□□□□□ -0.53
PKP1-202ENST00000352845 SRGAP2O75044 1071 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 KRT14P02533 472 aa11.75□□□□□ -0.53
PKP1-202ENST00000352845 ALDH3A1P30838 453 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms