RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SLC26A8Q96RN1 970 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 NAT10Q9H0A0 1025 aaKnown RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 DNAJC25Q9H1X3 360 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 LIN7BQ9HAP6 207 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 GNL3LQ9NVN8 582 aaKnown RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 HDAC5Q9UQL6 1122 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 M0R2C6 588 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 IRAK2O43187 625 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 PRODHO43272 600 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 ALDH1L1O75891 902 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 PDCP20941 246 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 CARTPTQ16568 116 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 PDXDC2PQ6P474 469 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 C14orf80Q86SX3 495 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 SNX32Q86XE0 403 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 TGFBRAP1Q8WUH2 860 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 TTC17Q96AE7 1141 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 VPS11Q9H270 941 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 TMX1Q9H3N1 280 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 BCL2L12Q9HB09 334 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 SARS2Q9NP81 518 aaKnown RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 GNEQ9Y223 722 aaKnown RBP6.67□□□□□ -1.34
RFC1-201ENST00000349703 LAMC3Q9Y6N6 1575 aa6.67□□□□□ -1.34
RFC1-201ENST00000349703 ANKRD36BQ8N2N9 1353 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 RHPN2P1A8MT19 583 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 MX1P20591 662 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 GRK2P25098 689 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 KIF23Q02241 960 aaPredicted RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 RASA3Q14644 834 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 MINDY4Q4G0A6 757 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 DYMQ7RTS9 669 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 LIX1LQ8IVB5 337 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 ALDH16A1Q8IZ83 802 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 HIPK4Q8NE63 616 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 OXER1Q8TDS5 423 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 ARHGAP45Q92619 1136 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 INTS4Q96HW7 963 aaKnown RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 GPATCH3Q96I76 525 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 ESYT1Q9BSJ8 1104 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 ZNF287Q9HBT7 754 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 XAB2Q9HCS7 855 aaKnown RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 BSDC1Q9NW68 430 aaPredicted RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 AATFQ9NY61 560 aaKnown RBP eCLIP6.66□□□□□ -1.34
RFC1-201ENST00000349703 CEP131Q9UPN4 1083 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 H7C1D1 291 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 KCNH1O95259 989 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 MYCLP12524 364 aaPredicted RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 KRT10P13645 584 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 NBPF6Q5VWK0 638 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 SLC30A9Q6PML9 568 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 NFATC2IPQ8NCF5 419 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 NEK11Q8NG66 645 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 KIF18AQ8NI77 898 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 TSR2Q969E8 191 aaKnown RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 NBPF4Q96M43 638 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 GINM1Q9NU53 330 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 AXIN2Q9Y2T1 843 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 NSD3Q9BZ95 1437 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 PTPN14Q15678 1187 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 HSP90AB3PQ58FF7 597 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 TTC22Q5TAA0 569 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 ZNF566Q969W8 418 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 CCDC74AQ96AQ1 378 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 YME1L1Q96TA2 773 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 TIMMDC1Q9NPL8 285 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 PPIEQ9UNP9 301 aaKnown RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 FCF1Q9Y324 198 aaKnown RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 NUB1Q9Y5A7 615 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 PTPRGP23470 1445 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 IPO7O95373 1038 aaKnown RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 COPB2P35606 906 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 MXRA7P84157 204 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 PTK7Q13308 1070 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 LRRFIP1Q32MZ4 808 aaKnown RBP6.66□□□□□ -1.34
RFC1-201ENST00000349703 ZNF568Q3ZCX4 644 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 CNKSR1Q969H4 720 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 CCDC138Q96M89 665 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 IL1RAPL2Q9NP60 686 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 TBC1D23Q9NUY8 699 aa6.66□□□□□ -1.34
RFC1-201ENST00000349703 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.66□□□□□ -1.34
RFC1-201ENST00000349703 B4E1Z4 1266 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 CSPG5O95196 566 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 MBD4O95243 580 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 ITGA4P13612 1032 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 PAMP19021 973 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 ALAS2P22557 587 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 CCT5P48643 541 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 CENPCQ03188 943 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 SF3B3Q15393 1217 aaKnown RBP6.65□□□□□ -1.34
RFC1-201ENST00000349703 LLGL2Q6P1M3 1020 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 NSMFQ6X4W1 530 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 CNTROBQ8N137 903 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 IPCEF1Q8WWN9 437 aaPredicted RBP6.65□□□□□ -1.34
RFC1-201ENST00000349703 RILPL2Q969X0 211 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 VMP1Q96GC9 406 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 NUP62CLQ9H1M0 184 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 C12orf49Q9H741 205 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 PCDHB10Q9UN67 800 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 PHF24Q9UPV7 400 aa6.65□□□□□ -1.34
RFC1-201ENST00000349703 GPC6Q9Y625 555 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms