RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 CETN1Q12798 172 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 SFMBT2Q5VUG0 894 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 CAPS2Q9BXY5 557 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 TAOK3Q9H2K8 898 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 SLAIN2Q9P270 581 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 A0A1B0GTH6 734 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 SMIM23A6NLE4 172 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 CXCR5P32302 372 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 PTPAQ15257 358 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 CCDC114Q96M63 670 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 KRT13P13646 458 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 PLCG2P16885 1265 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 C2orf54Q08AI8 447 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 RAD9BQ6WBX8 426 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 MB21D1Q8N884 522 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 ENAHQ8N8S7 591 aaPredicted RBP17.25■□□□□ 0.35
PTPRU-201ENST00000345512 P2RX5Q93086 422 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 TCHHQ07283 1943 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 GSTTP1A0A1W2PQM5 241 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 PLA2G4AP47712 749 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 TRIM28Q13263 835 aaKnown RBP17.25■□□□□ 0.35
PTPRU-201ENST00000345512 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.25■□□□□ 0.35
PTPRU-201ENST00000345512 FHOD1Q9Y613 1164 aa17.25■□□□□ 0.35
PTPRU-201ENST00000345512 CETN3O15182 167 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 LIG3P49916 1009 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 MRPL12P52815 198 aaKnown RBP17.24■□□□□ 0.35
PTPRU-201ENST00000345512 NR1I3Q14994 352 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 ASIC2Q16515 512 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 MEX3CQ5U5Q3 659 aaKnown RBP17.24■□□□□ 0.35
PTPRU-201ENST00000345512 CTNNBL1Q8WYA6 563 aaPredicted RBP17.24■□□□□ 0.35
PTPRU-201ENST00000345512 PCDHA4Q9UN74 947 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 SUSD4Q5VX71 490 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 DHTKD1Q96HY7 919 aaPredicted RBP17.24■□□□□ 0.35
PTPRU-201ENST00000345512 LZTS2Q9BRK4 669 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 NHEJ1Q9H9Q4 299 aaPredicted RBP17.24■□□□□ 0.35
PTPRU-201ENST00000345512 ABCC12Q96J65 1359 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 PRCPP42785 496 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 NEK8Q86SG6 692 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 WDR66Q8TBY9 1149 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 TBC1D5Q92609 795 aa17.24■□□□□ 0.35
PTPRU-201ENST00000345512 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPRU-201ENST00000345512 VSNL1P62760 191 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 MRPS25P82663 173 aaKnown RBP17.23■□□□□ 0.35
PTPRU-201ENST00000345512 KCTD16Q68DU8 428 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 TMTC3Q6ZXV5 915 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 CEP57Q86XR8 500 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 IQCDQ96DY2 449 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 A6NNZ2 444 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 ZBED6P86452 979 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 SEPT7Q16181 437 aaKnown RBP17.23■□□□□ 0.35
PTPRU-201ENST00000345512 TUBB8Q3ZCM7 444 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 HDAC6Q9UBN7 1215 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 TSKSQ9UJT2 592 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 HPSEQ9Y251 543 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 PTPROQ16827 1216 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 TRIM31Q9BZY9 425 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 TTC26A0AVF1 554 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 ADCY7P51828 1080 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 RASSF7Q02833 373 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 RPS6KA1Q15418 735 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 POTEDQ86YR6 584 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 SELENOSQ9BQE4 189 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 DISC1Q9NRI5 854 aa17.23■□□□□ 0.35
PTPRU-201ENST00000345512 CCDC172P0C7W6 258 aa17.22■□□□□ 0.35
PTPRU-201ENST00000345512 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
PTPRU-201ENST00000345512 PXDNQ92626 1479 aa17.22■□□□□ 0.35
PTPRU-201ENST00000345512 STXBP4Q6ZWJ1 553 aa17.22■□□□□ 0.35
PTPRU-201ENST00000345512 EYA3Q99504 573 aa17.22■□□□□ 0.35
PTPRU-201ENST00000345512 VWA3BQ502W6 1294 aa17.22■□□□□ 0.35
PTPRU-201ENST00000345512 CCDC155Q8N6L0 562 aa17.22■□□□□ 0.35
PTPRU-201ENST00000345512 LSM14BQ9BX40 385 aaKnown RBP17.22■□□□□ 0.35
PTPRU-201ENST00000345512 CCNE1P24864 410 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 ERVV-1B6SEH8 477 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 GOLGA8KD6RF30 607 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 CRKLP46109 303 aaKnown RBP17.21■□□□□ 0.35
PTPRU-201ENST00000345512 IRX5P78411 483 aaPredicted RBP17.21■□□□□ 0.35
PTPRU-201ENST00000345512 MYOCDQ8IZQ8 938 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 NMT2O60551 498 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 GUCY2DQ02846 1103 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
PTPRU-201ENST00000345512 CCDC26Q8TAB7 109 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 THAP9Q9H5L6 903 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 SALL1Q9NSC2 1324 aa17.21■□□□□ 0.35
PTPRU-201ENST00000345512 LGALS16A8MUM7 142 aa17.21■□□□□ 0.34
PTPRU-201ENST00000345512 POLR2FP61218 127 aaKnown RBP17.21■□□□□ 0.34
PTPRU-201ENST00000345512 GALNT17Q6IS24 598 aa17.21■□□□□ 0.34
PTPRU-201ENST00000345512 CCDC170Q8IYT3 715 aa17.21■□□□□ 0.34
PTPRU-201ENST00000345512 CHP1Q99653 195 aa17.21■□□□□ 0.34
PTPRU-201ENST00000345512 TMEM110-MUSTN1A8MSY1 372 aa17.2■□□□□ 0.34
PTPRU-201ENST00000345512 MOCS3O95396 460 aa17.2■□□□□ 0.34
PTPRU-201ENST00000345512 TBC1D8O95759 1140 aa17.2■□□□□ 0.34
PTPRU-201ENST00000345512 PLCG1P19174 1290 aa17.2■□□□□ 0.34
PTPRU-201ENST00000345512 SLC7A5Q01650 507 aa17.2■□□□□ 0.34
PTPRU-201ENST00000345512 LRRC45Q96CN5 670 aa17.2■□□□□ 0.34
PTPRU-201ENST00000345512 EPB41L4AQ9HCS5 686 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms