RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 FBXL16Q8N461 479 aa15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 MMP19Q99542 508 aa15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 RIPK3Q9Y572 518 aa15.27■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ELNP15502 786 aa15.26■□□□□ 0.03
HLA-DQA1-201ENST00000343139 GRM4Q14833 912 aa15.26■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ADCK5Q3MIX3 580 aa15.26■□□□□ 0.03
HLA-DQA1-201ENST00000343139 MAP3K21Q5TCX8 1036 aa15.26■□□□□ 0.03
HLA-DQA1-201ENST00000343139 TRIB2Q92519 343 aa15.26■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ACAD9Q9H845 621 aa15.26■□□□□ 0.03
HLA-DQA1-201ENST00000343139 MAD2L2Q9UI95 211 aa15.26■□□□□ 0.03
HLA-DQA1-201ENST00000343139 SNX14Q9Y5W7 946 aa15.26■□□□□ 0.03
HLA-DQA1-201ENST00000343139 INHAP05111 366 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 GOLGA8HP0CJ92 632 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CALM1P0DP23 149 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CALM2P0DP24 149 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CALM3P0DP25 149 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 PSMA5P28066 241 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 SMARCA1P28370 1054 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 RGS19P49795 217 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 MSL3Q8N5Y2 521 aaKnown RBP15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 AGBL1Q96MI9 1066 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 TMEM106CQ9BVX2 250 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 SENP2Q9HC62 589 aa15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 BIN2Q9UBW5 565 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQA1-201ENST00000343139 RPTORQ8N122 1335 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 DNAJC25-GNG10A0A024R161 153 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 KLRF2D3W0D1 207 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 COBLO75128 1261 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 KIF5BP33176 963 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 RCAN1P53805 252 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 COL9A3Q14050 684 aaPredicted RBP15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ADGRF4Q8IZF3 695 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CHMP4CQ96CF2 233 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 MTMR8Q96EF0 704 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CCPG1Q9ULG6 757 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 PLXNB2O15031 1838 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CENPFP49454 3210 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 PFASO15067 1338 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CCDC69A6NI79 296 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 GJB1P08034 283 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ZNF792Q3KQV3 632 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 MFSD14CQ5VZR4 134 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CCDC174Q6PII3 467 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ZNF467Q7Z7K2 595 aaPredicted RBP15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 STAG2Q8N3U4 1231 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 NPLOC4Q8TAT6 608 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 TRERF1Q96PN7 1200 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 LZTS2Q9BRK4 669 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 TM6SF1Q9BZW5 370 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 UBA5Q9GZZ9 404 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 RIOX1Q9H6W3 641 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 PAK6Q9NQU5 681 aaPredicted RBP15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 RNF146Q9NTX7 359 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 NRBP1Q9UHY1 535 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 SLC12A7Q9Y666 1083 aa15.24■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CCL5P13501 91 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 GNAQP50148 359 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ANAPC15P60006 121 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 TRAF1Q13077 416 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 MTFR1Q15390 333 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CCL14Q16627 93 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 BLOC1S2Q6QNY1 142 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 NFXL1Q6ZNB6 911 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ANKRD35Q8N283 1001 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 RGS22Q8NE09 1264 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CTCFLQ8NI51 663 aaPredicted RBP15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 IL17RAQ96F46 866 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 DDX11Q96FC9 970 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 MAML3Q96JK9 1138 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 AGXT2Q9BYV1 514 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 JMJD4Q9H9V9 463 aa15.23■□□□□ 0.03
HLA-DQA1-201ENST00000343139 DOCK3Q8IZD9 2030 aa15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ALAS1P13196 640 aa15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CDC37Q16543 378 aaPredicted RBP15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 JAKMIP1Q96N16 626 aaKnown RBP15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 SPZ1Q9BXG8 430 aa15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 RNF208Q9H0X6 261 aa15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 HMX1Q9NP08 348 aaPredicted RBP15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 A1CFQ9NQ94 594 aaKnown RBP15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 GPHNQ9NQX3 736 aaPredicted RBP15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 FLRT1Q9NZU1 646 aa15.22■□□□□ 0.03
HLA-DQA1-201ENST00000343139 COL11A1P12107 1806 aaPredicted RBP15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 LOC102724159A0A0B4J2E5 919 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ZBTB5O15062 677 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 PRKAR2AP13861 404 aaKnown RBP15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 RPS6KB1P23443 525 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 GJA8P48165 433 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 SNAP25P60880 206 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 CACNB2Q08289 660 aaPredicted RBP15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 PPP2R5BQ15173 497 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 PWP2Q15269 919 aaKnown RBP15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 MAMDC4Q6UXC1 1216 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 SYNE3Q6ZMZ3 975 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 UNC93B1Q9H1C4 597 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ZSWIM6Q9HCJ5 1215 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 HOMER2Q9NSB8 354 aa15.21■□□□□ 0.03
HLA-DQA1-201ENST00000343139 ABCB11O95342 1321 aa15.21■□□□□ 0.02
HLA-DQA1-201ENST00000343139 SYNGAP1Q96PV0 1343 aa15.21■□□□□ 0.02
HLA-DQA1-201ENST00000343139 PGK2P07205 417 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms