RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 PCDHAC2Q9Y5I4 1007 aa22.14■■□□□ 1.14
NHLRC1-201ENST00000340650 ROBO3Q96MS0 1386 aa22.14■■□□□ 1.14
NHLRC1-201ENST00000340650 ADAMTSL1Q8N6G6 1762 aa22.14■■□□□ 1.13
NHLRC1-201ENST00000340650 CDK5RAP2Q96SN8 1893 aa22.14■■□□□ 1.13
NHLRC1-201ENST00000340650 SCN9AQ15858 1988 aa22.14■■□□□ 1.13
NHLRC1-201ENST00000340650 TUBB4BP68371 445 aa22.14■■□□□ 1.13
NHLRC1-201ENST00000340650 ZSCAN26Q16670 478 aa22.14■■□□□ 1.13
NHLRC1-201ENST00000340650 RAD9BQ6WBX8 426 aa22.14■■□□□ 1.13
NHLRC1-201ENST00000340650 CATIPQ7Z7H3 387 aa22.14■■□□□ 1.13
NHLRC1-201ENST00000340650 DIS3L2Q8IYB7 885 aaKnown RBP22.14■■□□□ 1.13
NHLRC1-201ENST00000340650 USP40Q9NVE5 1235 aa22.14■■□□□ 1.13
NHLRC1-201ENST00000340650 PBX1P40424 430 aa22.13■■□□□ 1.13
NHLRC1-201ENST00000340650 IRX2Q9BZI1 471 aaPredicted RBP22.13■■□□□ 1.13
NHLRC1-201ENST00000340650 DDX4Q9NQI0 724 aaKnown RBP22.13■■□□□ 1.13
NHLRC1-201ENST00000340650 SRPRBQ9Y5M8 271 aaKnown RBP22.13■■□□□ 1.13
NHLRC1-201ENST00000340650 USP17L3A6NCW0 530 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 USP17L4A6NCW7 530 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 GUCY1A2P33402 732 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 BEND6Q5SZJ8 279 aaPredicted RBP22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 USP17L1Q7RTZ2 530 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 GOLGA5Q8TBA6 731 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 PPP1R1BQ9UD71 204 aaPredicted RBP22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 KIF5CO60282 957 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 CRKP46108 304 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 APOBEC3HQ6NTF7 200 aaKnown RBP22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 GRAMD1CQ8IYS0 662 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 IQUBQ8NA54 791 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 SUPT20HQ8NEM7 779 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 IL17RBQ9NRM6 502 aa22.12■■□□□ 1.13
NHLRC1-201ENST00000340650 CCDC196A0A1B0GTZ2 297 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 YDJCA8MPS7 323 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 TEX33O43247 280 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 TSPY3P0CV98 308 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 TSPY8P0CW00 308 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 TROAPQ12815 778 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 R3HDM1Q15032 1099 aaKnown RBP22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 CDC42EP5Q6NZY7 148 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 RASGRP2Q7LDG7 609 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 PPFIBP1Q86W92 1011 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 ZNF444Q8N0Y2 327 aaPredicted RBP22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 TRERF1Q96PN7 1200 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 FECHP22830 423 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 RBM5P52756 815 aaKnown RBP eCLIP22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 RBL2Q08999 1139 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 SPATA1Q5VX52 437 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 HHIPL2Q6UWX4 724 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 LZTFL1Q9NQ48 299 aa22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 ZNF277Q9NRM2 450 aaPredicted RBP22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 CWC15Q9P013 229 aaKnown RBP22.11■■□□□ 1.13
NHLRC1-201ENST00000340650 RASA1P20936 1047 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 CDK8P49336 464 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 RCAN1P53805 252 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 RCSD1Q6JBY9 416 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 HDXQ7Z353 690 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 IGSF22Q8N9C0 903 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 CEP131Q9UPN4 1083 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 PCDHB6Q9Y5E3 794 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 C16orf86Q6ZW13 317 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 TRIM22Q8IYM9 498 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 CRACR2BQ8N4Y2 399 aaPredicted RBP22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 ADD3Q9UEY8 706 aaKnown RBP22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 KCNJ14Q9UNX9 436 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 DLEC1Q9Y238 1755 aa22.1■■□□□ 1.13
NHLRC1-201ENST00000340650 DDX60LQ5H9U9 1706 aaKnown RBP22.09■■□□□ 1.13
NHLRC1-201ENST00000340650 PLEKHA8P1O95397 391 aa22.09■■□□□ 1.13
NHLRC1-201ENST00000340650 CACNB3P54284 484 aa22.09■■□□□ 1.13
NHLRC1-201ENST00000340650 GYS2P54840 703 aa22.09■■□□□ 1.13
NHLRC1-201ENST00000340650 CDKAL1Q5VV42 579 aa22.09■■□□□ 1.13
NHLRC1-201ENST00000340650 RTKN2Q8IZC4 609 aa22.09■■□□□ 1.13
NHLRC1-201ENST00000340650 ZSWIM4Q9H7M6 989 aa22.09■■□□□ 1.13
NHLRC1-201ENST00000340650 MFAP3LO75121 409 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 POLD1P28340 1107 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 NFIAQ12857 509 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 CUL4BQ13620 913 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 CCDC51Q96ER9 411 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 hCG_1642624A0A1W2PR95 340 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 ERLIN1O75477 346 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 CTAGE1Q96RT6 745 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 PNKPQ96T60 521 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 MTFR1LQ9H019 292 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 CSRNP2Q9H175 543 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 PUF60Q9UHX1 559 aaKnown RBP22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 L1RE1Q9UN81 338 aa22.08■■□□□ 1.13
NHLRC1-201ENST00000340650 A0A0U1RQJ8 604 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 DDAH1O94760 285 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 LMAN1P49257 510 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 ATRIPQ8WXE1 791 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 ZDHHC15Q96MV8 337 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 SYNRGQ9UMZ2 1314 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 DEXIO95424 95 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 ACTN2P35609 894 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 ZNF569Q5MCW4 686 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 USP49Q70CQ1 688 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 SH3RF1Q7Z6J0 888 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 LARGE2Q8N3Y3 721 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 KAT14Q9H8E8 782 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 ZNF287Q9HBT7 754 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 PDE11AQ9HCR9 933 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 STX8Q9UNK0 236 aa22.07■■□□□ 1.12
NHLRC1-201ENST00000340650 ITIH6Q6UXX5 1313 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms