RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 HTATIP2Q9BUP3 242 aa24.62■■□□□ 1.53
RAB28-203ENST00000338176 RNF146Q9NTX7 359 aa24.62■■□□□ 1.53
RAB28-203ENST00000338176 FDX1P10109 184 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 ZNF543Q08ER8 600 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 MUM1L1Q5H9M0 696 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 BTNL9Q6UXG8 535 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 IQCA1Q86XH1 822 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 DGKHQ86XP1 1220 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 ANKRD35Q8N283 1001 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 CHST13Q8NET6 341 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 FGD4Q96M96 766 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 KRT23Q9C075 422 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 TNKSO95271 1327 aa24.61■■□□□ 1.53
RAB28-203ENST00000338176 SNHG28P0DPA3 235 aa24.6■■□□□ 1.53
RAB28-203ENST00000338176 RANBP17Q9H2T7 1088 aaKnown RBP24.6■■□□□ 1.53
RAB28-203ENST00000338176 DIS3Q9Y2L1 958 aaKnown RBP24.6■■□□□ 1.53
RAB28-203ENST00000338176 PFASO15067 1338 aa24.6■■□□□ 1.53
RAB28-203ENST00000338176 MCM3APO60318 1980 aa24.6■■□□□ 1.53
RAB28-203ENST00000338176 CNTN2Q02246 1040 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 STOX1Q6ZVD7 989 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 PNMA1Q8ND90 353 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 TRERF1Q96PN7 1200 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 C11orf49Q9H6J7 331 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 U3KPZ7 1027 aaPredicted RBP24.59■■□□□ 1.53
RAB28-203ENST00000338176 CAPN2P17655 700 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.59■■□□□ 1.53
RAB28-203ENST00000338176 ANKS1AQ92625 1134 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 CCDC136Q96JN2 1154 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 ACAD9Q9H845 621 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 CNNM2Q9H8M5 875 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 PCDH10Q9P2E7 1040 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 CCPG1Q9ULG6 757 aa24.59■■□□□ 1.53
RAB28-203ENST00000338176 SEPT4O43236 478 aa24.58■■□□□ 1.53
RAB28-203ENST00000338176 MAP4K1Q92918 833 aa24.58■■□□□ 1.53
RAB28-203ENST00000338176 UBA5Q9GZZ9 404 aa24.58■■□□□ 1.53
RAB28-203ENST00000338176 KAT14Q9H8E8 782 aa24.58■■□□□ 1.53
RAB28-203ENST00000338176 A1CFQ9NQ94 594 aaKnown RBP24.58■■□□□ 1.53
RAB28-203ENST00000338176 FBXO40Q9UH90 709 aa24.58■■□□□ 1.53
RAB28-203ENST00000338176 RBM8AQ9Y5S9 174 aaKnown RBP24.58■■□□□ 1.53
RAB28-203ENST00000338176 DDX49Q9Y6V7 483 aaKnown RBP24.58■■□□□ 1.53
RAB28-203ENST00000338176 LENG1Q96BZ8 264 aaPredicted RBP24.57■■□□□ 1.52
RAB28-203ENST00000338176 ESYT1Q9BSJ8 1104 aa24.57■■□□□ 1.52
RAB28-203ENST00000338176 SNAI1O95863 264 aaPredicted RBP24.57■■□□□ 1.52
RAB28-203ENST00000338176 GJC2Q5T442 439 aaPredicted RBP24.57■■□□□ 1.52
RAB28-203ENST00000338176 UBAC1Q9BSL1 405 aa24.57■■□□□ 1.52
RAB28-203ENST00000338176 LSG1Q9H089 658 aaKnown RBP24.57■■□□□ 1.52
RAB28-203ENST00000338176 E7EWF7 191 aa24.56■■□□□ 1.52
RAB28-203ENST00000338176 ICAM1P05362 532 aa24.56■■□□□ 1.52
RAB28-203ENST00000338176 ZNF865P0CJ78 1059 aaPredicted RBP24.56■■□□□ 1.52
RAB28-203ENST00000338176 COL6A1P12109 1028 aa24.56■■□□□ 1.52
RAB28-203ENST00000338176 SEC23AQ15436 765 aa24.56■■□□□ 1.52
RAB28-203ENST00000338176 BMP2KLQ5H9B9 411 aa24.56■■□□□ 1.52
RAB28-203ENST00000338176 CHST3Q7LGC8 479 aa24.56■■□□□ 1.52
RAB28-203ENST00000338176 PURBQ96QR8 312 aaKnown RBP24.56■■□□□ 1.52
RAB28-203ENST00000338176 SENP2Q9HC62 589 aa24.56■■□□□ 1.52
RAB28-203ENST00000338176 EVI5O60447 810 aa24.55■■□□□ 1.52
RAB28-203ENST00000338176 MSCO60682 206 aa24.55■■□□□ 1.52
RAB28-203ENST00000338176 MYCNP04198 464 aaPredicted RBP24.55■■□□□ 1.52
RAB28-203ENST00000338176 CCDC178Q5BJE1 867 aa24.55■■□□□ 1.52
RAB28-203ENST00000338176 COL9A3Q14050 684 aaPredicted RBP24.54■■□□□ 1.52
RAB28-203ENST00000338176 TKFCQ3LXA3 575 aa24.54■■□□□ 1.52
RAB28-203ENST00000338176 LCTP09848 1927 aa24.54■■□□□ 1.52
RAB28-203ENST00000338176 ASTN1O14525 1302 aa24.54■■□□□ 1.52
RAB28-203ENST00000338176 SOWAHBA6NEL2 793 aa24.54■■□□□ 1.52
RAB28-203ENST00000338176 POTEB2H3BUK9 544 aa24.54■■□□□ 1.52
RAB28-203ENST00000338176 NT5C2P49902 561 aa24.54■■□□□ 1.52
RAB28-203ENST00000338176 IFIT1BQ5T764 474 aaKnown RBP24.54■■□□□ 1.52
RAB28-203ENST00000338176 MAMDC4Q6UXC1 1216 aa24.54■■□□□ 1.52
RAB28-203ENST00000338176 FAM133AQ8N9E0 248 aa24.54■■□□□ 1.52
RAB28-203ENST00000338176 NFIBO00712 420 aa24.53■■□□□ 1.52
RAB28-203ENST00000338176 TRDNQ13061 729 aa24.53■■□□□ 1.52
RAB28-203ENST00000338176 NSMFQ6X4W1 530 aa24.53■■□□□ 1.52
RAB28-203ENST00000338176 C7orf61Q8IZ16 206 aa24.53■■□□□ 1.52
RAB28-203ENST00000338176 SENP6Q9GZR1 1112 aaPredicted RBP24.53■■□□□ 1.52
RAB28-203ENST00000338176 ZHX1Q9UKY1 873 aaPredicted RBP24.53■■□□□ 1.52
RAB28-203ENST00000338176 SYNGAP1Q96PV0 1343 aa24.52■■□□□ 1.52
RAB28-203ENST00000338176 LRRC26Q2I0M4 334 aa24.52■■□□□ 1.52
RAB28-203ENST00000338176 GPATCH4Q5T3I0 446 aaKnown RBP24.52■■□□□ 1.52
RAB28-203ENST00000338176 KIAA1211Q6ZU35 1233 aa24.52■■□□□ 1.52
RAB28-203ENST00000338176 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.52■■□□□ 1.52
RAB28-203ENST00000338176 CYP39A1Q9NYL5 469 aa24.52■■□□□ 1.52
RAB28-203ENST00000338176 CNPY2Q9Y2B0 182 aa24.52■■□□□ 1.52
RAB28-203ENST00000338176 ARMCX2Q7L311 632 aa24.52■■□□□ 1.52
RAB28-203ENST00000338176 ZNF467Q7Z7K2 595 aaPredicted RBP24.52■■□□□ 1.52
RAB28-203ENST00000338176 CCDC144CPQ8IYA2 1237 aa24.52■■□□□ 1.52
RAB28-203ENST00000338176 STAG2Q8N3U4 1231 aa24.52■■□□□ 1.52
RAB28-203ENST00000338176 NRBP1Q9UHY1 535 aa24.52■■□□□ 1.52
RAB28-203ENST00000338176 RANBP2P49792 3224 aaKnown RBP24.51■■□□□ 1.51
RAB28-203ENST00000338176 PGK1P00558 417 aa24.51■■□□□ 1.51
RAB28-203ENST00000338176 ANTXR2P58335 489 aa24.51■■□□□ 1.51
RAB28-203ENST00000338176 MSL3Q8N5Y2 521 aaKnown RBP24.51■■□□□ 1.51
RAB28-203ENST00000338176 CLEC4DQ8WXI8 215 aa24.51■■□□□ 1.51
RAB28-203ENST00000338176 ANO2Q9NQ90 1003 aa24.51■■□□□ 1.51
RAB28-203ENST00000338176 COLQQ9Y215 455 aaPredicted RBP24.51■■□□□ 1.51
RAB28-203ENST00000338176 NR2E3Q9Y5X4 410 aa24.51■■□□□ 1.51
RAB28-203ENST00000338176 DNM1LO00429 736 aa24.5■■□□□ 1.51
RAB28-203ENST00000338176 IFIT3O14879 490 aaKnown RBP24.5■■□□□ 1.51
RAB28-203ENST00000338176 ADCY6O43306 1168 aa24.5■■□□□ 1.51
RAB28-203ENST00000338176 ATN1P54259 1190 aaPredicted RBP24.5■■□□□ 1.51
RAB28-203ENST00000338176 LRRC41Q15345 812 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms