RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 NBNO60934 754 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 PDHA1P08559 390 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 TBC1D8BQ0IIM8 1120 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 TMEM132EQ6IEE7 984 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 DDX42Q86XP3 938 aaKnown RBP eCLIP11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 PASKQ96RG2 1323 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 ICA1Q05084 483 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 PCDHB15Q9Y5E8 787 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 NINQ8N4C6 2090 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 ABCD1P33897 745 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 BEND3Q5T5X7 828 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 ANO5Q75V66 913 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 TRIM8Q9BZR9 551 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 THAP12O43422 761 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 DDIT3P35638 169 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 DAB2IPQ5VWQ8 1189 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 CC2D1AQ6P1N0 951 aaPredicted RBP11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 RETREG2Q8NC44 543 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 TEKT1Q969V4 418 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 GRAMD1AQ96CP6 724 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 HIC2Q96JB3 615 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 ATP6V0A4Q9HBG4 840 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 OLA1Q9NTK5 396 aaKnown RBP11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 INTUQ9ULD6 942 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 HLA-DPA1P20036 260 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 POSTNQ15063 836 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 LONRF3Q496Y0 759 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 LRRC8BQ6P9F7 803 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 AATFQ9NY61 560 aaKnown RBP eCLIP11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 GSTA4O15217 222 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 XPOTO43592 962 aaKnown RBP11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 ZFYVE1Q9HBF4 777 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 ZSCAN32Q9NX65 697 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 DYTNA2CJ06 578 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 GMNCA6NCL1 334 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 PLCD1P51178 756 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 SNX1Q13596 522 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 Q6ZUG5 572 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 C17orf50Q8WW18 174 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 CATSPER2Q96P56 530 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 FAM192AQ9GZU8 254 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 EPN3Q9H201 632 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 KCNH3Q9ULD8 1083 aa11.25□□□□□ -0.61
SPTBN1-201ENST00000333896 STRNO43815 780 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 E2F6O75461 281 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 H3BRJ5 948 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 MMEP08473 750 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 FAM180AQ6UWF9 173 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 TRIM59Q8IWR1 403 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 LRRC37BQ96QE4 947 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 ARIH1Q9Y4X5 557 aaPredicted RBP11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 SESN1Q9Y6P5 492 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 KRIT1O00522 736 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 RARS2Q5T160 578 aaKnown RBP11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 OGFOD1Q8N543 542 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 ANKRD44Q8N8A2 993 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 NR1H4Q96RI1 486 aaPredicted RBP11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 VPS16Q9H269 839 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 PAPOLBQ9NRJ5 636 aaKnown RBP11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 AMFRQ9UKV5 643 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 ENO4A6NNW6 628 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 DKC1O60832 514 aaKnown RBP eCLIP11.24□□□□□ -0.612e-17■■■■■ 41.8
SPTBN1-201ENST00000333896 AP1B1Q10567 949 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 FOXD4Q12950 439 aaPredicted RBP11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 TSHZ3Q63HK5 1081 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 DCUN1D2Q6PH85 259 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 NESP48681 1621 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 CTIFO43310 598 aaKnown RBP11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 PAPOLAP51003 745 aaKnown RBP11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 TRAF5O00463 557 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 HORMAD1Q86X24 394 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 PDLIM2Q96JY6 352 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 CAPN11Q9UMQ6 739 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 IKBKBO14920 756 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 TUBA4AP68366 448 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 MRPL28Q13084 256 aaKnown RBP11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 TEDDM1Q5T9Z0 273 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 C4orf50Q6ZRC1 276 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 PHKBQ93100 1093 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 PANX2Q96RD6 677 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 ANTXR1Q9H6X2 564 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 ANGPTL3Q9Y5C1 460 aa11.24□□□□□ -0.61
SPTBN1-201ENST00000333896 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.23□□□□□ -0.615e-8■■■■■ 53.4
SPTBN1-201ENST00000333896 NDE1Q9NXR1 346 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 NFE2L3Q9Y4A8 694 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 POLR3AO14802 1390 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 MAP3K5Q99683 1374 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 KRT14P02533 472 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 GNAQP50148 359 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 SLC12A1Q13621 1099 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 FAM96AQ9H5X1 160 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 KRT79Q5XKE5 535 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 KLC3Q6P597 504 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 RNF217Q8TC41 542 aa11.23□□□□□ -0.61
SPTBN1-201ENST00000333896 CRNKL1Q9BZJ0 848 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms