RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 STAT2P52630 851 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 OAZ1P54368 228 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 CUL4AQ13619 759 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 RRP12Q5JTH9 1297 aaKnown RBP11.37□□□□□ -0.59
SYN3-201ENST00000332840 MFSD14CQ5VZR4 134 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 RCSD1Q6JBY9 416 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 IQCA1Q86XH1 822 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 RIOX2Q8IUF8 465 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 LRRC47Q8N1G4 583 aaKnown RBP11.37□□□□□ -0.59
SYN3-201ENST00000332840 SLC17A8Q8NDX2 589 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 U2AF1L4Q8WU68 220 aaKnown RBP11.37□□□□□ -0.59
SYN3-201ENST00000332840 CNNM2Q9H8M5 875 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 HMX1Q9NP08 348 aaPredicted RBP11.37□□□□□ -0.59
SYN3-201ENST00000332840 PAK6Q9NQU5 681 aaPredicted RBP11.37□□□□□ -0.59
SYN3-201ENST00000332840 LAMA3Q16787 3333 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 E7EWF7 191 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 PEX10O60683 326 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 TOP1P11387 765 aaKnown RBP11.36□□□□□ -0.59
SYN3-201ENST00000332840 CPA1P15085 419 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 DDIT3P35638 169 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 HAND2P61296 217 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 KCTD2Q14681 263 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 TMEM132BQ14DG7 1078 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 MAP3K21Q5TCX8 1036 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 NOL8Q76FK4 1167 aaKnown RBP11.36□□□□□ -0.59
SYN3-201ENST00000332840 DPP9Q86TI2 863 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 NCAPG2Q86XI2 1143 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 DCAF4Q8WV16 495 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 TRIB2Q92519 343 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 INTS4Q96HW7 963 aaKnown RBP11.36□□□□□ -0.59
SYN3-201ENST00000332840 NUP88Q99567 741 aaPredicted RBP11.36□□□□□ -0.59
SYN3-201ENST00000332840 KRT23Q9C075 422 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.36□□□□□ -0.59
SYN3-201ENST00000332840 UNC93B1Q9H1C4 597 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 SH2B1Q9NRF2 756 aaPredicted RBP11.36□□□□□ -0.59
SYN3-201ENST00000332840 FBXO28Q9NVF7 368 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 FBXO40Q9UH90 709 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 PNMA2Q9UL42 364 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 ZNF214Q9UL59 606 aaPredicted RBP11.36□□□□□ -0.59
SYN3-201ENST00000332840 ISY1Q9ULR0 285 aaKnown RBP11.36□□□□□ -0.59
SYN3-201ENST00000332840 TAF6LQ9Y6J9 622 aa11.36□□□□□ -0.59
SYN3-201ENST00000332840 MSCO60682 206 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 SGPL1O95470 568 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 ADORA2AP29274 412 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 TRDNQ13061 729 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 IKQ13123 557 aaPredicted RBP11.35□□□□□ -0.59
SYN3-201ENST00000332840 OLFML2BQ68BL8 750 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 STOX1Q6ZVD7 989 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 DHX32Q7L7V1 743 aaKnown RBP11.35□□□□□ -0.59
SYN3-201ENST00000332840 TBC1D10CQ8IV04 446 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 DEFB118Q96PH6 123 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 SLC38A10Q9HBR0 1119 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 IL17RBQ9NRM6 502 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 LAMA4Q16363 1823 aa11.35□□□□□ -0.59
SYN3-201ENST00000332840 UNC80Q8N2C7 3258 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 TMEM232C9JQI7 657 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 SNRNP48Q6IEG0 339 aaKnown RBP11.34□□□□□ -0.59
SYN3-201ENST00000332840 DGKHQ86XP1 1220 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 ANKLE1Q8NAG6 615 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 REPS2Q8NFH8 660 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 MMP19Q99542 508 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 HTATIP2Q9BUP3 242 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 NRBP1Q9UHY1 535 aa11.34□□□□□ -0.59
SYN3-201ENST00000332840 DIS3Q9Y2L1 958 aaKnown RBP11.34□□□□□ -0.59
SYN3-201ENST00000332840 BAZ2AQ9UIF9 1905 aaKnown RBP11.34□□□□□ -0.59
SYN3-201ENST00000332840 GREB1LQ9C091 1923 aaPredicted RBP11.33□□□□□ -0.6
SYN3-201ENST00000332840 SOX1O00570 391 aaPredicted RBP11.33□□□□□ -0.6
SYN3-201ENST00000332840 NMT2O60551 498 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 FARP2O94887 1054 aaPredicted RBP11.33□□□□□ -0.6
SYN3-201ENST00000332840 TFRCP02786 760 aaKnown RBP11.33□□□□□ -0.6
SYN3-201ENST00000332840 NUCB2P80303 420 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 EXOSC10Q01780 885 aaKnown RBP11.33□□□□□ -0.6
SYN3-201ENST00000332840 CCDC96Q2M329 555 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 TKFCQ3LXA3 575 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYN3-201ENST00000332840 RALYLQ86SE5 291 aaKnown RBP11.33□□□□□ -0.6
SYN3-201ENST00000332840 MSL3Q8N5Y2 521 aaKnown RBP11.33□□□□□ -0.6
SYN3-201ENST00000332840 CHST13Q8NET6 341 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 UBAC1Q9BSL1 405 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 NBPF3Q9H094 633 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 INCENPQ9NQS7 918 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.33□□□□□ -0.6
SYN3-201ENST00000332840 NEDD4P46934 1319 aa11.33□□□□□ -0.6
SYN3-201ENST00000332840 A0A0G2JMZ2 1700 aa11.32□□□□□ -0.6
SYN3-201ENST00000332840 KDM4AO75164 1064 aa11.32□□□□□ -0.6
SYN3-201ENST00000332840 FGD1P98174 961 aa11.32□□□□□ -0.6
SYN3-201ENST00000332840 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
SYN3-201ENST00000332840 TOB2Q14106 344 aaPredicted RBP11.32□□□□□ -0.6
SYN3-201ENST00000332840 GPATCH4Q5T3I0 446 aaKnown RBP11.32□□□□□ -0.6
SYN3-201ENST00000332840 Q6ZUG5 572 aa11.32□□□□□ -0.6
SYN3-201ENST00000332840 CPXCR1Q8N123 301 aa11.32□□□□□ -0.6
SYN3-201ENST00000332840 TMEM47Q9BQJ4 181 aa11.32□□□□□ -0.6
SYN3-201ENST00000332840 KAT14Q9H8E8 782 aa11.32□□□□□ -0.6
SYN3-201ENST00000332840 TACC3Q9Y6A5 838 aa11.32□□□□□ -0.6
SYN3-201ENST00000332840 LAMA2P24043 3122 aaKnown RBP11.32□□□□□ -0.6
SYN3-201ENST00000332840 WDR19Q8NEZ3 1342 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms