RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 SLF1Q9BQI6 1058 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 ZMYND12Q9H0C1 365 aa13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 RANBP17Q9H2T7 1088 aaKnown RBP13.9□□□□□ -0.19
TRIM49B-201ENST00000332682 A0A0G2JLL6 359 aaPredicted RBP13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 CXCL11O14625 94 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 FLOT1O75955 427 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 GJA5P36382 358 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 GNL2Q13823 731 aaKnown RBP13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 MYSM1Q5VVJ2 828 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 GALNT17Q6IS24 598 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 PRRT2Q7Z6L0 340 aaPredicted RBP13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 C2orf69Q8N8R5 385 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 PRPF38AQ8NAV1 312 aaKnown RBP13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 BRMS1Q9HCU9 246 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 PPP1R9AQ9ULJ8 1098 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 PCDHA4Q9UN74 947 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 CNPY2Q9Y2B0 182 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 PCDHA1Q9Y5I3 950 aa13.89□□□□□ -0.19
TRIM49B-201ENST00000332682 SMCHD1A6NHR9 2005 aa13.88□□□□□ -0.19
TRIM49B-201ENST00000332682 M0R2N6 131 aa13.88□□□□□ -0.19
TRIM49B-201ENST00000332682 KRT85P78386 507 aa13.88□□□□□ -0.19
TRIM49B-201ENST00000332682 FBXO11Q86XK2 927 aa13.88□□□□□ -0.19
TRIM49B-201ENST00000332682 BLIDQ8IZY5 108 aa13.88□□□□□ -0.19
TRIM49B-201ENST00000332682 PASKQ96RG2 1323 aa13.88□□□□□ -0.19
TRIM49B-201ENST00000332682 SMCO2A6NFE2 343 aa13.87□□□□□ -0.19
TRIM49B-201ENST00000332682 NCLP19338 710 aaKnown RBP13.87□□□□□ -0.19
TRIM49B-201ENST00000332682 EARS2Q5JPH6 523 aaKnown RBP13.87□□□□□ -0.19
TRIM49B-201ENST00000332682 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
TRIM49B-201ENST00000332682 PROCA1Q8NCQ7 364 aaPredicted RBP13.87□□□□□ -0.19
TRIM49B-201ENST00000332682 SLC10A4Q96EP9 437 aa13.87□□□□□ -0.19
TRIM49B-201ENST00000332682 GDPD2Q9HCC8 539 aa13.87□□□□□ -0.19
TRIM49B-201ENST00000332682 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
TRIM49B-201ENST00000332682 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
TRIM49B-201ENST00000332682 FAM205CA6NFA0 338 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP17L15C9J2P7 530 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP17L13C9JLJ4 530 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP17L11C9JVI0 530 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP17L18D6R9N7 530 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP17L22D6RA61 530 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP17L17D6RBQ6 530 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP17L19D6RCP7 530 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP17L20D6RJB6 530 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 FIBPO43427 364 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 TAL1P17542 331 aaPredicted RBP13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 GNA11P29992 359 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 ADCY7P51828 1080 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP17L24Q0WX57 530 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 MOGSQ13724 837 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USH1GQ495M9 461 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 NOM1Q5C9Z4 860 aaKnown RBP13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 TREML2Q5T2D2 321 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 CCDC174Q6PII3 467 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 CATSPERGQ6ZRH7 1159 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 RASGRP4Q8TDF6 673 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 USP28Q96RU2 1077 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 FTOQ9C0B1 505 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 SLC38A10Q9HBR0 1119 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 TFIP11Q9UBB9 837 aaKnown RBP13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 ZNF536O15090 1300 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 A0A0G2JMZ2 1700 aa13.86□□□□□ -0.19
TRIM49B-201ENST00000332682 MYPNQ86TC9 1320 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 GOLGA6L22H0YM25 854 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 VWA5AO00534 786 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 ATL3Q6DD88 541 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 GADL1Q6ZQY3 521 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 TMEM87AQ8NBN3 555 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 ATG4CQ96DT6 458 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 WNK4Q96J92 1243 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 ZNF396Q96N95 335 aaPredicted RBP13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 RIC8AQ9NPQ8 531 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 PCDHA6Q9UN73 950 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 ADAMTS5Q9UNA0 930 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 PCDHA8Q9Y5H6 950 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 OPLAHO14841 1288 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 ICAM1P05362 532 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 FDX1P10109 184 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 HOXA7P31268 230 aaPredicted RBP13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 DSG3P32926 999 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 TOB1P50616 345 aaPredicted RBP13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 TRAF1Q13077 416 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 SNAPC2Q13487 334 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 COG2Q14746 738 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 RILPL1Q5EBL4 403 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 PIK3AP1Q6ZUJ8 805 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 REXO1Q8N1G1 1221 aaKnown RBP13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 SMC1BQ8NDV3 1235 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 BICD2Q8TD16 824 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 CUL5Q93034 780 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 PSTPIP2Q9H939 334 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 POLR3EQ9NVU0 708 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 CFAP45Q9UL16 551 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 AGTPBP1Q9UPW5 1226 aa13.85□□□□□ -0.19
TRIM49B-201ENST00000332682 SPDYE16A6NNV3 312 aaPredicted RBP13.84□□□□□ -0.19
TRIM49B-201ENST00000332682 NASPP49321 788 aaPredicted RBP13.84□□□□□ -0.19
TRIM49B-201ENST00000332682 CLK2P49760 499 aaKnown RBP13.84□□□□□ -0.19
TRIM49B-201ENST00000332682 HUNKP57058 714 aa13.84□□□□□ -0.19
TRIM49B-201ENST00000332682 FASTKD5Q7L8L6 764 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms