RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 CYP4A11Q02928 519 aa12.84□□□□□ -0.35
ZNF543-201ENST00000321545 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
ZNF543-201ENST00000321545 QRICH1Q2TAL8 776 aa12.84□□□□□ -0.35
ZNF543-201ENST00000321545 PDCL2Q8N4E4 241 aa12.84□□□□□ -0.35
ZNF543-201ENST00000321545 CLSTN2Q9H4D0 955 aa12.84□□□□□ -0.35
ZNF543-201ENST00000321545 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
ZNF543-201ENST00000321545 COL4A1P02462 1669 aa12.83□□□□□ -0.35
ZNF543-201ENST00000321545 U2AF2P26368 475 aaKnown RBP eCLIP12.83□□□□□ -0.36
ZNF543-201ENST00000321545 GRM4Q14833 912 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 STX1AQ16623 288 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 MYO3BQ8WXR4 1341 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
ZNF543-201ENST00000321545 NFKBIEO00221 500 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 NEMFO60524 1076 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 ASIC1P78348 528 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 SLC30A10Q6XR72 485 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 KRT26Q7Z3Y9 468 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 MAD2L2Q9UI95 211 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 PCDHA4Q9UN74 947 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 CNTNAP5Q8WYK1 1306 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 SPEF2Q9C093 1822 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 IBSPP21815 317 aaPredicted RBP12.83□□□□□ -0.36
ZNF543-201ENST00000321545 STAT2P52630 851 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 ASPRV1Q53RT3 343 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 CALML4Q96GE6 196 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 CCDC39Q9UFE4 941 aa12.83□□□□□ -0.36
ZNF543-201ENST00000321545 WDR19Q8NEZ3 1342 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 HMGCS2P54868 508 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 NCAPH2Q6IBW4 605 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
ZNF543-201ENST00000321545 CCPG1Q9ULG6 757 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 CICQ96RK0 1608 aaPredicted RBP12.82□□□□□ -0.36
ZNF543-201ENST00000321545 GAKO14976 1311 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 CYTH3O43739 400 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 MTMR2Q13614 643 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 CALCRLQ16602 461 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 LONRF3Q496Y0 759 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 GPATCH4Q5T3I0 446 aaKnown RBP12.82□□□□□ -0.36
ZNF543-201ENST00000321545 FAM200AQ8TCP9 573 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 CSADQ9Y600 493 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 NRDCO43847 1150 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
ZNF543-201ENST00000321545 C15orf52Q6ZUT6 534 aaKnown RBP12.82□□□□□ -0.36
ZNF543-201ENST00000321545 MTERF4Q7Z6M4 381 aaKnown RBP12.82□□□□□ -0.36
ZNF543-201ENST00000321545 CBX8Q9HC52 389 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 RAVER2Q9HCJ3 691 aaKnown RBP12.82□□□□□ -0.36
ZNF543-201ENST00000321545 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
ZNF543-201ENST00000321545 ELP1O95163 1332 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 PPP1R12BO60237 982 aaPredicted RBP12.81□□□□□ -0.36
ZNF543-201ENST00000321545 CUTAO60888 179 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 ASNSP08243 561 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 SYDE2Q5VT97 1194 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 TYW1BQ6NUM6 668 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 NEK8Q86SG6 692 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 FAM151AQ8WW52 585 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 SH2D4AQ9H788 454 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 TMOD4Q9NZQ9 345 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.81□□□□□ -0.36
ZNF543-201ENST00000321545 V9GYY5 206 aaPredicted RBP12.81□□□□□ -0.36
ZNF543-201ENST00000321545 TDP2O95551 362 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 EEPD1Q7L9B9 569 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 SNX29Q8TEQ0 813 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 LZTS2Q9BRK4 669 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 AMNQ9BXJ7 453 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 LRWD1Q9UFC0 647 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 NUP188Q5SRE5 1749 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 CTAGE5O15320 804 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 PKN1Q16512 942 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 SH3BP5LQ7L8J4 393 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 KRT25Q7Z3Z0 450 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 TRPM4Q8TD43 1214 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
ZNF543-201ENST00000321545 SYT17Q9BSW7 474 aa12.81□□□□□ -0.36
ZNF543-201ENST00000321545 BAZ2AQ9UIF9 1905 aaKnown RBP12.8□□□□□ -0.36
ZNF543-201ENST00000321545 DPCR1Q3MIW9 517 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 DCAF15Q66K64 600 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
ZNF543-201ENST00000321545 RAB34Q9BZG1 259 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 PCDHA5Q9Y5H7 936 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 FAM170AA1A519 330 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 POTEMA6NI47 508 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 LMNB1P20700 586 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 KRT79Q5XKE5 535 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 C11orf57Q6ZUT1 292 aaPredicted RBP12.8□□□□□ -0.36
ZNF543-201ENST00000321545 MOB2Q70IA6 237 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 CHURC1Q8WUH1 139 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 ZKSCAN5Q9Y2L8 839 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
ZNF543-201ENST00000321545 ZNF445P59923 1031 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 IQUBQ8NA54 791 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 HOOK2Q96ED9 719 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 PSMD1Q99460 953 aa12.8□□□□□ -0.36
ZNF543-201ENST00000321545 MYH3P11055 1940 aa12.79□□□□□ -0.36
ZNF543-201ENST00000321545 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
ZNF543-201ENST00000321545 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
ZNF543-201ENST00000321545 MEIS1O00470 390 aa12.79□□□□□ -0.36
ZNF543-201ENST00000321545 CCT6AP40227 531 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms